CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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19547_YOL067C
(
Saccharomyces mikatae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
19547_YOL067C
T051978_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RTG1
M08486_2.00
Saccharomyces cerevisiae
HNTBACTCMYN
NRKGAGTVAND
Misc
DeBoer et al.(2011)
YOL067C_1493
0.914
1.000
RTG1
M08487_2.00
Saccharomyces cerevisiae
NGTGACCN
NGGTCACN
Misc
DeBoer et al.(2011)
YOL067C_1494
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
19547_YOL067C
bHLH
12
97
SCGANFKNDRKRRDKINDRIQELLSIIPKDFFRDYYGNSGSNDTLSESTPGASGLSSKAKGTGTKDGKPNKGQILTQAVEYISHLQ
Links
Other
bHLH
family TFs
Other
Saccharomyces mikatae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RTG1
Saccharomyces cerevisiae
YOL067C
D
0.914
20063_YOL067C
Saccharomyces paradoxus
20063_YOL067C
I
0.914
SU7_3138
Saccharomyces arboricola
SU7_3138
I
0.884
22478_YOL067C
Saccharomyces bayanus
22478_YOL067C
I
0.884