CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014990.1
(
Alligator sinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Alligator_sinensis_CCG014990.1
T046665_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hand1
M08769_2.00
Mus musculus
WGABRNWDNSCAGRNNH
DNNYCTGSNHWNYVTCW
Misc
Kulakovskiy et al.(2013)
HAND1_MOUSE.H11MO.0.C
0.914
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014990.1
bHLH
37
89
KRAAGPRKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLM
Links
Other
bHLH
family TFs
Other
Alligator sinensis
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000016692
Ailuropoda melanoleuca
ENSAMEG00000016692
I
0.914
ENSAPLG00000007863
Anas platyrhynchos
ENSAPLG00000007863
I
0.914
HAND1
Bos taurus
ENSBTAG00000002335
I
0.914
HAND1
Canis familiaris
ENSCAFG00000017641
I
0.914
HAND1
Callithrix jacchus
ENSCJAG00000009817
I
0.914
HAND1
Cavia porcellus
ENSCPOG00000024064
I
0.914
ENSCSAG00000010805
Chlorocebus sabaeus
ENSCSAG00000010805
I
0.914
HAND1
Dasypus novemcinctus
ENSDNOG00000007934
I
0.914
Hand1
Dipodomys ordii
ENSDORG00000015170
I
0.914
HAND1
Equus caballus
ENSECAG00000005327
I
0.914
HAND1
Erinaceus europaeus
ENSEEUG00000003255
I
0.914
ENSFALG00000008331
Ficedula albicollis
ENSFALG00000008331
I
0.914
HAND1
Felis catus
ENSFCAG00000014986
I
0.914
HAND1
Homo sapiens
ENSG00000113196
I
0.914
ENSGALG00000026787
Gallus gallus
ENSGALG00000026787
I
0.914
HAND1
Gorilla gorilla
ENSGGOG00000004311
I
0.914
ENSLACG00000018666
Latimeria chalumnae
ENSLACG00000018666
I
0.914
HAND1
Loxodonta africana
ENSLAFG00000017517
I
0.914
HAND1
Myotis lucifugus
ENSMLUG00000008901
I
0.914
HAND1
Macaca mulatta
ENSMMUG00000010621
I
0.914
HAND1
Monodelphis domestica
ENSMODG00000008678
I
0.914
ENSMPUG00000013570
Mustela putorius furo
ENSMPUG00000013570
I
0.914
Hand1
Mus musculus
ENSMUSG00000037335
D
0.914
ENSNLEG00000016584
Nomascus leucogenys
ENSNLEG00000016584
I
0.914
HAND1
Ornithorhynchus anatinus
ENSOANG00000005097
I
0.914
ENSOARG00000009843
Ovis aries
ENSOARG00000009843
I
0.914
HAND1
Oryctolagus cuniculus
ENSOCUG00000011099
I
0.914
HAND1
Otolemur garnettii
ENSOGAG00000024691
I
0.914
HAND1
Ochotona princeps
ENSOPRG00000014560
I
0.914
ENSPANG00000013720
Papio anubis
ENSPANG00000013720
I
0.914
HAND1
Procavia capensis
ENSPCAG00000006706
I
0.914
ENSPPYG00000015975
Pongo abelii
ENSPPYG00000015975
I
0.914
HAND1
Pan troglodytes
ENSPTRG00000017446
I
0.914
HAND1
Pteropus vampyrus
ENSPVAG00000002261
I
0.914
Hand1
Rattus norvegicus
ENSRNOG00000002582
I
0.914
ENSSHAG00000009358
Sarcophilus harrisii
ENSSHAG00000009358
I
0.914
ENSSSCG00000017070
Sus scrofa
ENSSSCG00000017070
I
0.914
ENSSTOG00000025850
Ictidomys tridecemlineatus
ENSSTOG00000025850
I
0.914
HAND1
Tursiops truncatus
ENSTTRG00000002725
I
0.914
Aan_R010602
Calypte anna
Aan_R010602
I
0.914
Afo_R012042
Aptenodytes forsteri
Afo_R012042
I
0.914
ENSBTAP00000003015-D1
Bos grunniens
ENSBTAP00000003015-D1
I
0.914
ENSP00000231121
Macaca fascicularis
ENSP00000231121
I
0.914
Myotis_brandtii_HAND1_10034795
Myotis brandtii
Myotis_brandtii_HAND1_10034795
I
0.914
HAND1
Gasterosteus aculeatus
ENSGACG00000020816
I
0.894
ENSONIG00000013234
Oreochromis niloticus
ENSONIG00000013234
I
0.894
HAND1
Oryzias latipes
ENSORLG00000015508
I
0.894
ENSPFOG00000012614
Poecilia formosa
ENSPFOG00000012614
I
0.894
HAND1
Tetraodon nigroviridis
ENSTNIG00000007631
I
0.894
HAND1
Takifugu rubripes
ENSTRUG00000003992
I
0.894
ENSXMAG00000015432
Xiphophorus maculatus
ENSXMAG00000015432
I
0.894
HAND1
Echinops telfairi
ENSETEG00000010988
I
0.861
SPU_017287
Strongylocentrotus purpuratus
SPU_017287
I
0.846
HAND2
Homo sapiens
ENSG00000164107
D
0.393