Cucsa.395400 (Cucumis sativus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cucsa.395400 T048248_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BHLH74
M06720_2.00 		Arabidopsis thaliana
SDHSDNDNNCACGTGVNNNNW
WNNNNBCACGTGNNHNHSDHS		 Dap-seq
OMalley et al.(2016)
bHLH74_col_a 		0.856 0.843
BHLH74
M06721_2.00 		Arabidopsis thaliana
CACGTGAY
RTCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH74_colamp_a 		0.856 0.843
gw1.270.82.1
M01758_2.00 		Physcomitrella patens
NCACGTGH
DCACGTGN		 PBM
Weirauch et al.(2014)
pTH8457 		0.856 0.824
BHLH77
M06736_2.00 		Arabidopsis thaliana
NKCACGTGVHNWHNB
VNDWNDBCACGTGMN		 Dap-seq
OMalley et al.(2016)
bHLH77_col_a 		0.856 0.804
BHLH49
M01052_2.00 		Arabidopsis thaliana
NNCACGTGCN
NGCACGTGNN		 PBM
Sullivan et al.(2014)
pTH7309 		0.844 0.824
PK06517.1
M01122_2.00 		Cannabis sativa
NCACGTGC
GCACGTGN		 PBM
Lambert et al.(2019)
pTH10104 		0.844 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.395400.1 bHLH 212 262

Links

Other bHLH family TFs
Other Cucumis sativus TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla022995 Citrullus lanatus Cla022995 I 0.914
VIT_01s0244g00010 Vitis vinifera VIT_01s0244g00010 I 0.875
Cucsa.353050 Cucumis sativus Cucsa.353050 I 0.856
30170.m013667 Ricinus communis 30170.m013667 I 0.856
cassava22408.valid.m1 Manihot esculenta cassava22408.valid.m1 I 0.856
gw1.270.82.1 Physcomitrella patens gw1.270.82.1 D 0.856
Cagra.0026s0060 Capsella grandiflora Cagra.0026s0060 I 0.856
Bostr.19424s0266 Boechera stricta Bostr.19424s0266 I 0.856
Bostr.13671s0476 Boechera stricta Bostr.13671s0476 I 0.856
gw1.28.196.1 Physcomitrella patens gw1.28.196.1 I 0.856
Pm005441 Prunus mume Pm005441 I 0.856
Cla010130 Citrullus lanatus Cla010130 I 0.856
PRUPE_ppa007762mg Prunus persica PRUPE_ppa007762mg I 0.856
POPTR_0005s19020 Populus trichocarpa POPTR_0005s19020 I 0.856
POPTR_0002s11540 Populus trichocarpa POPTR_0002s11540 I 0.856
scaffold_101064.1 Arabidopsis lyrata scaffold_101064.1 I 0.856
Al_scaffold_0003_2564 Arabidopsis lyrata Al_scaffold_0003_2564 I 0.856
Ca_09212 Cicer arietinum Ca_09212 I 0.856
VIT_18s0001g08600 Vitis vinifera VIT_18s0001g08600 I 0.856
Cagra.4395s0200 Capsella grandiflora Cagra.4395s0200 I 0.856
Carubv10009514m.g Capsella rubella Carubv10009514m.g I 0.856
SapurV1A.0004s0280 Salix purpurea SapurV1A.0004s0280 I 0.856
orange1.1g014374m.g Citrus sinensis orange1.1g014374m.g I 0.856
MDP0000313643 Malus domestica MDP0000313643 I 0.856
SapurV1A.0336s0050 Salix purpurea SapurV1A.0336s0050 I 0.856
Thhalv10002586m.g Eutrema salsugineum Thhalv10002586m.g I 0.856
PK12518.1 Cannabis sativa PK12518.1 I 0.856
Thhalv10025750m.g Eutrema salsugineum Thhalv10025750m.g I 0.856
Thhalv10008002m.g Eutrema salsugineum Thhalv10008002m.g I 0.856
MDP0000231650 Malus domestica MDP0000231650 I 0.856
Lus10012484.g Linum usitatissimum Lus10012484.g I 0.856
Eucgr.F00100 Eucalyptus grandis Eucgr.F00100 I 0.856
Ciclev10001249m.g Citrus clementina Ciclev10001249m.g I 0.856
Carubv10013979m.g Capsella rubella Carubv10013979m.g I 0.856
Eucgr.F02220 Eucalyptus grandis Eucgr.F02220 I 0.856
evm.TU.supercontig_160.32 Carica papaya evm.TU.supercontig_160.32 I 0.856
Lus10006491.g Linum usitatissimum Lus10006491.g I 0.856
Gorai.010G028200 Gossypium raimondii Gorai.010G028200 I 0.856
gene02629-v1.0-hybrid Fragaria vesca gene02629-v1.0-hybrid I 0.856
MTR_1g017350 Medicago truncatula MTR_1g017350 I 0.856
TCM_034649 Theobroma cacao TCM_034649 I 0.856
Bo1g101470 Brassica oleracea Bo1g101470 I 0.856
Bo7g039150 Brassica oleracea Bo7g039150 I 0.856
Bra018461 Brassica rapa Bra018461 I 0.856
Bra028335 Brassica rapa Bra028335 I 0.856
GLYMA06G05181 Glycine max GLYMA06G05181 I 0.856
Bra031700 Brassica rapa Bra031700 I 0.856
GLYMA14G10180 Glycine max GLYMA14G10180 I 0.856
BHLH77 Arabidopsis thaliana AT3G23690 D 0.856
BHLH74 Arabidopsis thaliana AT1G10120 D 0.856
Bra019962 Brassica rapa Bra019962 I 0.856
Bra014972 Brassica rapa Bra014972 I 0.856
GLYMA0041S00210 Glycine max GLYMA0041S00210 I 0.856
Bo8g059100 Brassica oleracea Bo8g059100 I 0.856
Bo8g110780 Brassica oleracea Bo8g110780 I 0.856
GSMUA_Achr9G22300_001 Musa acuminata GSMUA_Achr9G22300_001 I 0.855
TCM_008405 Theobroma cacao TCM_008405 N 0.855
Bostr.12659s0370 Boechera stricta Bostr.12659s0370 I 0.844
Cagra.1157s0017 Capsella grandiflora Cagra.1157s0017 I 0.844
Bra038336 Brassica rapa Bra038336 I 0.844
BRADI3G38890 Brachypodium distachyon BRADI3G38890 I 0.844
BRADI4G32934 Brachypodium distachyon BRADI4G32934 I 0.844
Cagra.6677s0005 Capsella grandiflora Cagra.6677s0005 I 0.844
Carubv10020178m.g Capsella rubella Carubv10020178m.g I 0.844
Ciclev10031122m.g Citrus clementina Ciclev10031122m.g I 0.844
Eucgr.B03106 Eucalyptus grandis Eucgr.B03106 I 0.844
Carubv10009210m.g Capsella rubella Carubv10009210m.g I 0.844
Ciclev10004862m.g Citrus clementina Ciclev10004862m.g I 0.844
mgf007571m Mimulus guttatus mgf007571m I 0.844
e_gw1.280.47.1 Physcomitrella patens e_gw1.280.47.1 I 0.844
estExt_fgenesh1_pg.C_3120001 Physcomitrella patens estExt_fgenesh1_pg.C_3120001 I 0.844
gw1.145.145.1 Physcomitrella patens gw1.145.145.1 I 0.844
gw1.194.125.1 Physcomitrella patens gw1.194.125.1 I 0.844
Cucsa.374330 Cucumis sativus Cucsa.374330 I 0.844
fgenesh2_kg.2__1151__AT1G68920.3 Arabidopsis lyrata fgenesh2_kg.2__1151__AT1G68920.3 I 0.844
cassava29310.valid.m1 Manihot esculenta cassava29310.valid.m1 I 0.844
cassava43362.valid.m1 Manihot esculenta cassava43362.valid.m1 I 0.844
Cucsa.284270 Cucumis sativus Cucsa.284270 I 0.844
gw1.226.91.1 Physcomitrella patens gw1.226.91.1 I 0.844
CIB5 Arabidopsis lyrata fgenesh2_kg.1__2745__AT1G26260.3 I 0.844
Bra004348 Brassica rapa Bra004348 I 0.844
Aquca_002_00983 Aquilegia coerulea Aquca_002_00983 I 0.844
Aquca_006_00371 Aquilegia coerulea Aquca_006_00371 I 0.844
mgf000663m Mimulus guttatus mgf000663m I 0.844
gw1.69.191.1 Physcomitrella patens gw1.69.191.1 I 0.844
F775_16858 Aegilops tauschii F775_16858 I 0.844
gw1.377.16.1 Physcomitrella patens gw1.377.16.1 I 0.844
gw1.68.283.1 Physcomitrella patens gw1.68.283.1 I 0.844
Bostr.10273s0474 Boechera stricta Bostr.10273s0474 I 0.844
gene04513-v1.0-hybrid Fragaria vesca gene04513-v1.0-hybrid I 0.844
Pavir.Ha00788 Panicum virgatum Pavir.Ha00788 I 0.844
SapurV1A.0060s0600 Salix purpurea SapurV1A.0060s0600 I 0.844
SapurV1A.0071s0330 Salix purpurea SapurV1A.0071s0330 I 0.844
SapurV1A.0084s0420 Salix purpurea SapurV1A.0084s0420 I 0.844
Pavir.Fb01828 Panicum virgatum Pavir.Fb01828 I 0.844
Pavir.Fa00598 Panicum virgatum Pavir.Fa00598 I 0.844
BGIOSGA022687 Oryza indica BGIOSGA022687 I 0.844
Pavir.Ba01777 Panicum virgatum Pavir.Ba01777 I 0.844
Pavir.Bb02517 Panicum virgatum Pavir.Bb02517 I 0.844
BHLH49 Arabidopsis thaliana AT1G68920 D 0.844
SapurV1A.0570s0150 Salix purpurea SapurV1A.0570s0150 I 0.844
PK21234.1 Cannabis sativa PK21234.1 I 0.844
chr2.CM0124.380.nd Lotus japonicus chr2.CM0124.380.nd I 0.844
PDK_20s1433571g001 Phoenix dactylifera PDK_20s1433571g001 I 0.844
AMTR_s00006p00257020 Amborella trichopoda AMTR_s00006p00257020 I 0.844
PK06517.1 Cannabis sativa PK06517.1 D 0.844
BHLH76 Arabidopsis thaliana AT1G26260 I 0.844
Thhalv10018444m.g Eutrema salsugineum Thhalv10018444m.g I 0.844
AMTR_s00013p00245920 Amborella trichopoda AMTR_s00013p00245920 I 0.844
orange1.1g011621m.g Citrus sinensis orange1.1g011621m.g I 0.844
orange1.1g008631m.g Citrus sinensis orange1.1g008631m.g I 0.844
Gorai.005G148300 Gossypium raimondii Gorai.005G148300 I 0.844
Gorai.013G098600 Gossypium raimondii Gorai.013G098600 I 0.844
Bo6g108460 Brassica oleracea Bo6g108460 I 0.844
Bo2g062450 Brassica oleracea Bo2g062450 I 0.844
Gorai.005G022400 Gossypium raimondii Gorai.005G022400 I 0.844
gene16871-v1.0-hybrid Fragaria vesca gene16871-v1.0-hybrid I 0.844
evm.TU.supercontig_157.5 Carica papaya evm.TU.supercontig_157.5 I 0.844
cassava29309.valid.m1 Manihot esculenta cassava29309.valid.m1 I 0.844
gene06448-v1.0-hybrid Fragaria vesca gene06448-v1.0-hybrid I 0.844
Lus10013052.g Linum usitatissimum Lus10013052.g I 0.844
Lus10021968.g Linum usitatissimum Lus10021968.g I 0.844
MDP0000154272 Malus domestica MDP0000154272 I 0.844
BGIOSGA030954 Oryza indica BGIOSGA030954 I 0.844
MDP0000410728 Malus domestica MDP0000410728 I 0.844
MDP0000124019 Malus domestica MDP0000124019 I 0.844
Lus10041261.g Linum usitatissimum Lus10041261.g I 0.844
Lus10029110.g Linum usitatissimum Lus10029110.g I 0.844
Lus10030581.g Linum usitatissimum Lus10030581.g I 0.844
Lus10030908.g Linum usitatissimum Lus10030908.g I 0.844
evm.TU.supercontig_1.175 Carica papaya evm.TU.supercontig_1.175 I 0.844
cassava18003.valid.m1 Manihot esculenta cassava18003.valid.m1 I 0.844
ORGLA09G0105100 Oryza glaberrima ORGLA09G0105100 I 0.844
ORUFI09G14750 Oryza rufipogon ORUFI09G14750 I 0.844
OS06G0275600 Oryza sativa OS06G0275600 I 0.844
OS09G0474100 Oryza sativa OS09G0474100 I 0.844
ORGLA06G0299700 Oryza glaberrima ORGLA06G0299700 I 0.844
ORGLA06G0099500 Oryza glaberrima ORGLA06G0099500 I 0.844
OPUNC06G10230 Oryza punctata OPUNC06G10230 I 0.844
OPUNC09G12260 Oryza punctata OPUNC09G12260 I 0.844
OPUNC11G10440 Oryza punctata OPUNC11G10440 I 0.844
OS11G0442500 Oryza sativa OS11G0442500 I 0.844
PGSC0003DMG400001918 Solanum tuberosum PGSC0003DMG400001918 I 0.844
POPTR_0002s23650 Populus trichocarpa POPTR_0002s23650 I 0.844
GSMUA_Achr3G12130_001 Musa acuminata GSMUA_Achr3G12130_001 I 0.844
POPTR_0008s11240 Populus trichocarpa POPTR_0008s11240 I 0.844
POPTR_0010s14600 Populus trichocarpa POPTR_0010s14600 I 0.844
GSMUA_Achr3G13490_001 Musa acuminata GSMUA_Achr3G13490_001 I 0.844
PGSC0003DMG400019659 Solanum tuberosum PGSC0003DMG400019659 I 0.844
PGSC0003DMG400004580 Solanum tuberosum PGSC0003DMG400004580 I 0.844
PGSC0003DMG400008805 Solanum tuberosum PGSC0003DMG400008805 I 0.844
PGSC0003DMG400016608 Solanum tuberosum PGSC0003DMG400016608 I 0.844
ONIVA11G11880 Oryza nivara ONIVA11G11880 I 0.844
ONIVA09G14290 Oryza nivara ONIVA09G14290 I 0.844
GSMUA_Achr4G16120_001 Musa acuminata GSMUA_Achr4G16120_001 I 0.844
MTR_5g048860 Medicago truncatula MTR_5g048860 I 0.844
MTR_8g065740 Medicago truncatula MTR_8g065740 I 0.844
OB06G19820 Oryza brachyantha OB06G19820 I 0.844
MLOC_15000 Hordeum vulgare MLOC_15000 I 0.844
LPERR09G10040 Leersia perrieri LPERR09G10040 I 0.844
GSMUA_Achr9G18510_001 Musa acuminata GSMUA_Achr9G18510_001 I 0.844
GSMUA_Achr9G28060_001 Musa acuminata GSMUA_Achr9G28060_001 I 0.844
LPERR06G09390 Leersia perrieri LPERR06G09390 I 0.844
OB09G20330 Oryza brachyantha OB09G20330 I 0.844
OB11G19520 Oryza brachyantha OB11G19520 I 0.844
OLONG_022349 Oryza longistaminata OLONG_022349 I 0.844
OMERI06G12470 Oryza meridionalis OMERI06G12470 I 0.844
OMERI11G10380 Oryza meridionalis OMERI11G10380 I 0.844
OLONG_013606 Oryza longistaminata OLONG_013606 I 0.844
OGLUM11G11800 Oryza glumaepatula OGLUM11G11800 I 0.844
OBART06G10620 Oryza barthii OBART06G10620 I 0.844
OBART09G13780 Oryza barthii OBART09G13780 I 0.844
OGLUM09G14350 Oryza glumaepatula OGLUM09G14350 I 0.844
POPTR_0014s14650 Populus trichocarpa POPTR_0014s14650 I 0.844
PRUPE_ppa003543mg Prunus persica PRUPE_ppa003543mg I 0.844
VIT_05s0029g00390 Vitis vinifera VIT_05s0029g00390 I 0.844
GRMZM2G080168 Zea mays GRMZM2G080168 I 0.844
Ca_15961 Cicer arietinum Ca_15961 I 0.844
Cla005967 Citrullus lanatus Cla005967 I 0.844
GRMZM2G137541 Zea mays GRMZM2G137541 I 0.844
VIT_01s0010g00740 Vitis vinifera VIT_01s0010g00740 I 0.844
Traes_5BL_71717F042 Triticum aestivum Traes_5BL_71717F042 I 0.844
Traes_5DL_7A35CD284 Triticum aestivum Traes_5DL_7A35CD284 I 0.844
TRIUR3_10022 Triticum urartu TRIUR3_10022 I 0.844
Cla020637 Citrullus lanatus Cla020637 I 0.844
GLYMA04G05091 Glycine max GLYMA04G05091 I 0.844
GLYMA01G09400 Glycine max GLYMA01G09400 I 0.844
30183.m001293 Ricinus communis 30183.m001293 I 0.844
GSMUA_Achr9G07330_001 Musa acuminata GSMUA_Achr9G07330_001 I 0.844
30138.m003881 Ricinus communis 30138.m003881 I 0.844
Pm030530 Prunus mume Pm030530 I 0.844
GLYMA02G13860 Glycine max GLYMA02G13860 I 0.844
Pm007777 Prunus mume Pm007777 I 0.844
Pm024579 Prunus mume Pm024579 I 0.844
GRMZM2G171818 Zea mays GRMZM2G171818 I 0.844
TCM_020177 Theobroma cacao TCM_020177 I 0.844
Sb07g028945 Sorghum bicolor Sb07g028945 I 0.844
GRMZM5G818643 Zea mays GRMZM5G818643 I 0.844
SELMODRAFT_106386 Selaginella moellendorffii SELMODRAFT_106386 I 0.844
SELMODRAFT_439190 Selaginella moellendorffii SELMODRAFT_439190 I 0.844
Sb02g027430 Sorghum bicolor Sb02g027430 I 0.844
Sb0010s017130 Sorghum bicolor Sb0010s017130 I 0.844
PRUPE_ppa003619mg Prunus persica PRUPE_ppa003619mg I 0.844
GSMUA_Achr1G19120_001 Musa acuminata GSMUA_Achr1G19120_001 I 0.844
PRUPE_ppa008085mg Prunus persica PRUPE_ppa008085mg I 0.844
SELMODRAFT_72702 Selaginella moellendorffii SELMODRAFT_72702 I 0.844
SELMODRAFT_72704 Selaginella moellendorffii SELMODRAFT_72704 I 0.844
Solyc09g097870.2 Solanum lycopersicum Solyc09g097870.2 I 0.844
Solyc12g098620.1 Solanum lycopersicum Solyc12g098620.1 I 0.844
TCM_011413 Theobroma cacao TCM_011413 I 0.844
Solyc05g010610.2 Solanum lycopersicum Solyc05g010610.2 I 0.844
Solyc01g010130.2 Solanum lycopersicum Solyc01g010130.2 I 0.844
Si015793m.g Setaria italica Si015793m.g I 0.844
Si026387m.g Setaria italica Si026387m.g I 0.844
Si029882m.g Setaria italica Si029882m.g I 0.844
cassava18004.valid.m1 Manihot esculenta cassava18004.valid.m1 I 0.844