Ciclev10030105m.g (Citrus clementina)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Ciclev10030105m.g T049557_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AMS
M09782_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AMS_01 		0.858 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10030105m bHLH 326 374

Links

Other bHLH family TFs
Other Citrus clementina TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g045155m.g Citrus sinensis orange1.1g045155m.g I 0.914
MDP0000405748 Malus domestica MDP0000405748 I 0.888
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.875
AMS Arabidopsis thaliana AT2G16910 D 0.858
Bo3g091780 Brassica oleracea Bo3g091780 I 0.858
Bo7g016210 Brassica oleracea Bo7g016210 I 0.858
Bra002004 Brassica rapa Bra002004 I 0.858
Bra013041 Brassica rapa Bra013041 I 0.858
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.858
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.858
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.858
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.858
AMS Populus trichocarpa POPTR_0009s13860 I 0.858
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.858
Ca_05416 Cicer arietinum Ca_05416 I 0.858
Ca_23693 Cicer arietinum Ca_23693 I 0.858
Ca_23694 Cicer arietinum Ca_23694 I 0.858
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.858
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.858
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.858
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.858
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.858
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.858
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.858
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.858
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.858
29842.m003700 Ricinus communis 29842.m003700 N 0.856
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.854
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.854
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.854
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.854
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.854
Gorai.011G019900 Gossypium raimondii Gorai.011G019900 N 0.852
cassava21844.m1 Manihot esculenta cassava21844.m1 N 0.846
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.845
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.845
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.845
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.845
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.845
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.845
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.845
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.845
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.845
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.845
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.845
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.842
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.842
Si006500m.g Setaria italica Si006500m.g I 0.842
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.842
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.842
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.842