AMS (Arabidopsis thaliana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 AT2G16910 T030616_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AMS
M09782_2.00		 Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AMS_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRM
M09784_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ICE1_01 		0.847 0.800
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT2G16910.1 bHLH 311 360

Links

Other bHLH family TFs
Other Arabidopsis thaliana TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g091780 Brassica oleracea Bo3g091780 I 0.914
Bo7g016210 Brassica oleracea Bo7g016210 I 0.914
Bra002004 Brassica rapa Bra002004 I 0.914
Bra013041 Brassica rapa Bra013041 I 0.914
GLYMA10G42830 Glycine max GLYMA10G42830 I 0.914
GLYMA20G24170 Glycine max GLYMA20G24170 I 0.914
MTR_1g112680 Medicago truncatula MTR_1g112680 I 0.914
Ca_05416 Cicer arietinum Ca_05416 I 0.914
Ca_23693 Cicer arietinum Ca_23693 I 0.914
Ca_23694 Cicer arietinum Ca_23694 I 0.914
Cagra.10862s0002 Capsella grandiflora Cagra.10862s0002 I 0.914
Carubv10016240m.g Capsella rubella Carubv10016240m.g I 0.914
Thhalv10022620m.g Eutrema salsugineum Thhalv10022620m.g I 0.914
LjSGA_106153.1 Lotus japonicus LjSGA_106153.1 I 0.914
POPTR_0018s13840 Populus trichocarpa POPTR_0018s13840 I 0.911
SapurV1A.0001s2820 Salix purpurea SapurV1A.0001s2820 I 0.911
AMS Arabidopsis lyrata fgenesh2_kg.3__3272__AT2G16910.1 I 0.884
AMS Populus trichocarpa POPTR_0009s13860 I 0.884
VIT_01s0127g00860 Vitis vinifera VIT_01s0127g00860 I 0.884
Bostr.18351s0148 Boechera stricta Bostr.18351s0148 I 0.884
Eucgr.G01783 Eucalyptus grandis Eucgr.G01783 I 0.884
evm.TU.supercontig_20.95 Carica papaya evm.TU.supercontig_20.95 I 0.884
gene23716-v1.0-hybrid Fragaria vesca gene23716-v1.0-hybrid I 0.884
MDP0000405748 Malus domestica MDP0000405748 I 0.884
SapurV1A.0218s0460 Salix purpurea SapurV1A.0218s0460 I 0.884
POPTR_0018s13830 Populus trichocarpa POPTR_0018s13830 I 0.881
SapurV1A.0140s0250 Salix purpurea SapurV1A.0140s0250 I 0.881
SapurV1A.3355s0020 Salix purpurea SapurV1A.3355s0020 I 0.881
BRADI4G17460 Brachypodium distachyon BRADI4G17460 I 0.877
F775_15875 Aegilops tauschii F775_15875 I 0.877
PGSC0003DMG401028788 Solanum tuberosum PGSC0003DMG401028788 I 0.877
Solyc06g068870.2 Solanum lycopersicum Solyc06g068870.2 I 0.877
Traes_4DS_7B0E8D459 Triticum aestivum Traes_4DS_7B0E8D459 I 0.877
TRIUR3_16046 Triticum urartu TRIUR3_16046 I 0.877
Lus10032542.g Linum usitatissimum Lus10032542.g I 0.877
Lus10043199.g Linum usitatissimum Lus10043199.g I 0.877
AMTR_s00019p00254380 Amborella trichopoda AMTR_s00019p00254380 I 0.871
BRADI3G01910 Brachypodium distachyon BRADI3G01910 I 0.871
GSMUA_Achr1G07330_001 Musa acuminata GSMUA_Achr1G07330_001 I 0.871
GSMUA_Achr1G07450_001 Musa acuminata GSMUA_Achr1G07450_001 I 0.871
MLOC_52192 Hordeum vulgare MLOC_52192 I 0.871
PGSC0003DMG400014246 Solanum tuberosum PGSC0003DMG400014246 I 0.871
Sb04g001650 Sorghum bicolor Sb04g001650 I 0.871
Aquca_019_00147 Aquilegia coerulea Aquca_019_00147 I 0.871
evm.TU.supercontig_1024.1 Carica papaya evm.TU.supercontig_1024.1 I 0.871
Pavir.Ab00204 Panicum virgatum Pavir.Ab00204 I 0.871
PDK_20s1347451g001 Phoenix dactylifera PDK_20s1347451g001 I 0.871
GLYMA16G26291 Glycine max GLYMA16G26291 I 0.868
POPTR_0006s07420 Populus trichocarpa POPTR_0006s07420 I 0.868
Si006500m.g Setaria italica Si006500m.g I 0.868
estExt_fgenesh1_pg.C_1240017 Physcomitrella patens estExt_fgenesh1_pg.C_1240017 I 0.868
gw1.90.96.1 Physcomitrella patens gw1.90.96.1 I 0.868
Aquca_072_00056 Aquilegia coerulea Aquca_072_00056 I 0.868
MLOC_56814 Hordeum vulgare MLOC_56814 I 0.866
PRUPE_ppa022211mg Prunus persica PRUPE_ppa022211mg I 0.864
TCM_006602 Theobroma cacao TCM_006602 I 0.864
Pm020879 Prunus mume Pm020879 I 0.864
PK03241.1 Cannabis sativa PK03241.1 I 0.864
mgf018455m Mimulus guttatus mgf018455m I 0.860
Ciclev10030105m.g Citrus clementina Ciclev10030105m.g I 0.858
orange1.1g045155m.g Citrus sinensis orange1.1g045155m.g I 0.858
POPTR_0018s13850 Populus trichocarpa POPTR_0018s13850 I 0.857
SapurV1A.0140s0240 Salix purpurea SapurV1A.0140s0240 I 0.857
SapurV1A.3355s0010 Salix purpurea SapurV1A.3355s0010 I 0.857
SELMODRAFT_16038 Selaginella moellendorffii SELMODRAFT_16038 I 0.851
SELMODRAFT_16039 Selaginella moellendorffii SELMODRAFT_16039 I 0.851
SELMODRAFT_430203 Selaginella moellendorffii SELMODRAFT_430203 I 0.851
SELMODRAFT_451590 Selaginella moellendorffii SELMODRAFT_451590 I 0.851
Si019518m.g Setaria italica Si019518m.g I 0.851
Traes_6AS_4C2F64614 Triticum aestivum Traes_6AS_4C2F64614 I 0.851
Cla016068 Citrullus lanatus Cla016068 I 0.851
Cucsa.010660 Cucumis sativus Cucsa.010660 I 0.851
e_gw1.25.105.1 Physcomitrella patens e_gw1.25.105.1 I 0.851
estExt_fgenesh1_pg.C_1590022 Physcomitrella patens estExt_fgenesh1_pg.C_1590022 I 0.851
mgf024029m Mimulus guttatus mgf024029m I 0.851
Gorai.009G002200 Gossypium raimondii Gorai.009G002200 I 0.851
BGIOSGA007229 Oryza indica BGIOSGA007229 I 0.848
GSMUA_Achr10G23370_001 Musa acuminata GSMUA_Achr10G23370_001 I 0.848
GSMUA_Achr7G16000_001 Musa acuminata GSMUA_Achr7G16000_001 I 0.848
OBART02G01550 Oryza barthii OBART02G01550 I 0.848
OGLUM02G01420 Oryza glumaepatula OGLUM02G01420 I 0.848
OMERI02G00890 Oryza meridionalis OMERI02G00890 I 0.848
ONIVA02G01430 Oryza nivara ONIVA02G01430 I 0.848
OPUNC02G01010 Oryza punctata OPUNC02G01010 I 0.848
ORGLA02G0014200 Oryza glaberrima ORGLA02G0014200 I 0.848
ORUFI02G01530 Oryza rufipogon ORUFI02G01530 I 0.848
TDR Oryza sativa OS02G0120500 I 0.848
estExt_gwp_gw1.C_1820005 Physcomitrella patens estExt_gwp_gw1.C_1820005 I 0.848
fgenesh1_pg.scaffold_1000274 Physcomitrella patens fgenesh1_pg.scaffold_1000274 I 0.848
mgf019723m Mimulus guttatus mgf019723m I 0.848
gene23715-v1.0-hybrid Fragaria vesca gene23715-v1.0-hybrid I 0.848
AMTR_s00016p00170610 Amborella trichopoda AMTR_s00016p00170610 I 0.847
SCRM2 Arabidopsis thaliana AT1G12860 I 0.847
SCRM Arabidopsis thaliana AT3G26744 D 0.847
BGIOSGA000206 Oryza indica BGIOSGA000206 I 0.847
BGIOSGA035358 Oryza indica BGIOSGA035358 I 0.847
Bo00285s440 Brassica oleracea Bo00285s440 I 0.847
Bo5g016510 Brassica oleracea Bo5g016510 I 0.847
Bo7g083870 Brassica oleracea Bo7g083870 I 0.847
Bo8g065080 Brassica oleracea Bo8g065080 I 0.847
Bo9g008020 Brassica oleracea Bo9g008020 I 0.847
Bra016749 Brassica rapa Bra016749 I 0.847
Bra019794 Brassica rapa Bra019794 I 0.847
Bra025226 Brassica rapa Bra025226 I 0.847
Bra032947 Brassica rapa Bra032947 I 0.847
Bra034246 Brassica rapa Bra034246 I 0.847
BRADI2G59497 Brachypodium distachyon BRADI2G59497 I 0.847
F775_14780 Aegilops tauschii F775_14780 I 0.847
ICE1 Arabidopsis lyrata fgenesh2_kg.5__441__AT3G26744.2 I 0.847
GLYMA04G37750 Glycine max GLYMA04G37750 I 0.847
GLYMA05G38530 Glycine max GLYMA05G38530 I 0.847
GLYMA06G17330 Glycine max GLYMA06G17330 I 0.847
GLYMA13G00480 Glycine max GLYMA13G00480 I 0.847
GLYMA16G05390 Glycine max GLYMA16G05390 I 0.847
GLYMA17G06610 Glycine max GLYMA17G06610 I 0.847
GLYMA19G27483 Glycine max GLYMA19G27483 I 0.847
GRMZM2G033356 Zea mays GRMZM2G033356 I 0.847
GRMZM2G172297 Zea mays GRMZM2G172297 I 0.847
GRMZM2G173534 Zea mays GRMZM2G173534 I 0.847
GSMUA_Achr10G12060_001 Musa acuminata GSMUA_Achr10G12060_001 I 0.847
GSMUA_Achr10G18380_001 Musa acuminata GSMUA_Achr10G18380_001 I 0.847
GSMUA_Achr6G08070_001 Musa acuminata GSMUA_Achr6G08070_001 I 0.847
LPERR01G37160 Leersia perrieri LPERR01G37160 I 0.847
LPERR11G11940 Leersia perrieri LPERR11G11940 I 0.847
MLOC_46407 Hordeum vulgare MLOC_46407 I 0.847
MLOC_76805 Hordeum vulgare MLOC_76805 I 0.847
MTR_3g498695 Medicago truncatula MTR_3g498695 I 0.847
OBART01G42600 Oryza barthii OBART01G42600 I 0.847
OBART11G15260 Oryza barthii OBART11G15260 I 0.847
OGLUM01G46870 Oryza glumaepatula OGLUM01G46870 I 0.847
OGLUM11G14700 Oryza glumaepatula OGLUM11G14700 I 0.847
OMERI01G39590 Oryza meridionalis OMERI01G39590 I 0.847
OMERI11G12580 Oryza meridionalis OMERI11G12580 I 0.847
ONIVA01G48650 Oryza nivara ONIVA01G48650 I 0.847
ONIVA12G10770 Oryza nivara ONIVA12G10770 I 0.847
OPUNC01G41620 Oryza punctata OPUNC01G41620 I 0.847
OPUNC11G12640 Oryza punctata OPUNC11G12640 I 0.847
ORGLA01G0363500 Oryza glaberrima ORGLA01G0363500 I 0.847
ORGLA11G0129200 Oryza glaberrima ORGLA11G0129200 I 0.847
ORUFI01G46010 Oryza rufipogon ORUFI01G46010 I 0.847
ORUFI11G16280 Oryza rufipogon ORUFI11G16280 I 0.847
OS01G0928000 Oryza sativa OS01G0928000 I 0.847
OS11G0523700 Oryza sativa OS11G0523700 I 0.847
POPTR_0012s10780 Populus trichocarpa POPTR_0012s10780 I 0.847
POPTR_0015s11650 Populus trichocarpa POPTR_0015s11650 I 0.847
PRUPE_ppa005038mg Prunus persica PRUPE_ppa005038mg I 0.847
PRUPE_ppa018220mg Prunus persica PRUPE_ppa018220mg I 0.847
Sb03g044660 Sorghum bicolor Sb03g044660 I 0.847
Sb05g019530 Sorghum bicolor Sb05g019530 I 0.847
SELMODRAFT_119431 Selaginella moellendorffii SELMODRAFT_119431 I 0.847
SELMODRAFT_138758 Selaginella moellendorffii SELMODRAFT_138758 I 0.847
SELMODRAFT_75047 Selaginella moellendorffii SELMODRAFT_75047 I 0.847
SELMODRAFT_91237 Selaginella moellendorffii SELMODRAFT_91237 I 0.847
SELMODRAFT_94010 Selaginella moellendorffii SELMODRAFT_94010 I 0.847
Si001874m.g Setaria italica Si001874m.g I 0.847
Si026212m.g Setaria italica Si026212m.g I 0.847
Solyc03g118310.2 Solanum lycopersicum Solyc03g118310.2 I 0.847
TCM_014741 Theobroma cacao TCM_014741 I 0.847
TCM_017336 Theobroma cacao TCM_017336 I 0.847
TRAES3BF001100060CFD_g Triticum aestivum TRAES3BF001100060CFD_g I 0.847
Traes_6AS_66A98BA55 Triticum aestivum Traes_6AS_66A98BA55 I 0.847
Traes_7AL_ACAC47D88 Triticum aestivum Traes_7AL_ACAC47D88 I 0.847
Traes_7BL_BF5300D88 Triticum aestivum Traes_7BL_BF5300D88 I 0.847
Traes_7DL_2A7EF919F Triticum aestivum Traes_7DL_2A7EF919F I 0.847
TRIUR3_17003 Triticum urartu TRIUR3_17003 I 0.847
VIT_01s0244g00130 Vitis vinifera VIT_01s0244g00130 I 0.847
VIT_14s0068g01200 Vitis vinifera VIT_14s0068g01200 I 0.847
VIT_17s0000g00330 Vitis vinifera VIT_17s0000g00330 I 0.847
Ca_01394 Cicer arietinum Ca_01394 I 0.847
Cla002682 Citrullus lanatus Cla002682 I 0.847
Cla003283 Citrullus lanatus Cla003283 I 0.847
Cla023112 Citrullus lanatus Cla023112 I 0.847
Pm016093 Prunus mume Pm016093 I 0.847
Pm024587 Prunus mume Pm024587 I 0.847
30147.m014419 Ricinus communis 30147.m014419 I 0.847
cassava17838.valid.m1 Manihot esculenta cassava17838.valid.m1 I 0.847
cassava37254.valid.m1 Manihot esculenta cassava37254.valid.m1 I 0.847
Cucsa.088960 Cucumis sativus Cucsa.088960 I 0.847
Cucsa.134750 Cucumis sativus Cucsa.134750 I 0.847
Cucsa.156040 Cucumis sativus Cucsa.156040 I 0.847
estExt_fgenesh1_pg.C_300202 Physcomitrella patens estExt_fgenesh1_pg.C_300202 I 0.847
estExt_Genewise1.C_510113 Physcomitrella patens estExt_Genewise1.C_510113 I 0.847
mgf012194m Mimulus guttatus mgf012194m I 0.847
mgf015974m Mimulus guttatus mgf015974m I 0.847
mgf016462m Mimulus guttatus mgf016462m I 0.847
Aquca_100_00035 Aquilegia coerulea Aquca_100_00035 I 0.847
Bostr.0556s0344 Boechera stricta Bostr.0556s0344 I 0.847
Bostr.13671s0164 Boechera stricta Bostr.13671s0164 I 0.847
Cagra.0568s0207 Capsella grandiflora Cagra.0568s0207 I 0.847
Cagra.23157s0001 Capsella grandiflora Cagra.23157s0001 I 0.847
Carubv10009081m.g Capsella rubella Carubv10009081m.g I 0.847
Carubv10017099m.g Capsella rubella Carubv10017099m.g I 0.847
Ciclev10015052m.g Citrus clementina Ciclev10015052m.g I 0.847
Eucgr.G01938 Eucalyptus grandis Eucgr.G01938 I 0.847
evm.TU.supercontig_70.77 Carica papaya evm.TU.supercontig_70.77 I 0.847
gene06435-v1.0-hybrid Fragaria vesca gene06435-v1.0-hybrid I 0.847
Gorai.001G275600 Gossypium raimondii Gorai.001G275600 I 0.847
Gorai.007G044800 Gossypium raimondii Gorai.007G044800 I 0.847
Gorai.007G072600 Gossypium raimondii Gorai.007G072600 I 0.847
MDP0000247912 Malus domestica MDP0000247912 I 0.847
MDP0000304669 Malus domestica MDP0000304669 I 0.847
MDP0000662999 Malus domestica MDP0000662999 I 0.847
orange1.1g011370m.g Citrus sinensis orange1.1g011370m.g I 0.847
orange1.1g047004m.g Citrus sinensis orange1.1g047004m.g I 0.847
Pavir.Ea03858 Panicum virgatum Pavir.Ea03858 I 0.847
Pavir.Eb03736 Panicum virgatum Pavir.Eb03736 I 0.847
Pavir.Hb00982 Panicum virgatum Pavir.Hb00982 I 0.847
SapurV1A.0517s0250 Salix purpurea SapurV1A.0517s0250 I 0.847
SapurV1A.0672s0200 Salix purpurea SapurV1A.0672s0200 I 0.847
SapurV1A.0774s0030 Salix purpurea SapurV1A.0774s0030 I 0.847
Thhalv10004059m.g Eutrema salsugineum Thhalv10004059m.g I 0.847
Thhalv10007566m.g Eutrema salsugineum Thhalv10007566m.g I 0.847
PK06841.1 Cannabis sativa PK06841.1 I 0.847
PK06940.1 Cannabis sativa PK06940.1 I 0.847
chr1.CM1880.50.nc Lotus japonicus chr1.CM1880.50.nc I 0.847
LjSGA_024382.1 Lotus japonicus LjSGA_024382.1 I 0.847
BRADI3G01901 Brachypodium distachyon BRADI3G01901 I 0.845
GRMZM2G119823 Zea mays GRMZM2G119823 I 0.844
VIT_03s0038g02540 Vitis vinifera VIT_03s0038g02540 I 0.844
PGSC0003DMG400008195 Solanum tuberosum PGSC0003DMG400008195 I 0.840
Solyc08g062780.1 Solanum lycopersicum Solyc08g062780.1 I 0.840
Gorai.008G036900 Gossypium raimondii Gorai.008G036900 I 0.840
MDP0000243628 Malus domestica MDP0000243628 I 0.839