CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.004G212900
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.004G212900
T049964_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.004G212900.1
bHLH
4
44
VRREKISERMKYLQDLVPGCNKITDKAGMLNEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.002G116400
Gossypium raimondii
Gorai.002G116400
N
0.914
Gorai.010G090500
Gossypium raimondii
Gorai.010G090500
N
0.914
PDK_20s1360531g001
Phoenix dactylifera
PDK_20s1360531g001
N
0.875
ORUFI06G11220
Oryza rufipogon
ORUFI06G11220
N
0.862
PDK_20s1499141g001
Phoenix dactylifera
PDK_20s1499141g001
N
0.862
ONIVA11G11880
Oryza nivara
ONIVA11G11880
I
0.862
Aquca_005_00610
Aquilegia coerulea
Aquca_005_00610
N
0.862
OBART11G12110
Oryza barthii
OBART11G12110
N
0.862
OB08G25860
Oryza brachyantha
OB08G25860
N
0.862
ONIVA06G12430
Oryza nivara
ONIVA06G12430
N
0.862
OGLUM06G11560
Oryza glumaepatula
OGLUM06G11560
N
0.862
OGLUM11G11800
Oryza glumaepatula
OGLUM11G11800
I
0.862
MLOC_57269
Hordeum vulgare
MLOC_57269
I
0.854
TRIUR3_17846
Triticum urartu
TRIUR3_17846
N
0.854
PGSC0003DMG401024463
Solanum tuberosum
PGSC0003DMG401024463
I
0.850
gene00752-v1.0-hybrid
Fragaria vesca
gene00752-v1.0-hybrid
N
0.850
PDK_20s1475851g002
Phoenix dactylifera
PDK_20s1475851g002
N
0.842
PDK_20s1360831g001
Phoenix dactylifera
PDK_20s1360831g001
N
0.841
BGIOSGA015290
Oryza indica
BGIOSGA015290
N
0.840
Pavir.J14571
Panicum virgatum
Pavir.J14571
N
0.838
Gorai.007G241100
Gossypium raimondii
Gorai.007G241100
N
0.777
Gorai.011G117300
Gossypium raimondii
Gorai.011G117300
N
0.777
Gorai.001G223600
Gossypium raimondii
Gorai.001G223600
N
0.777
Gorai.001G193500
Gossypium raimondii
Gorai.001G193500
N
0.777