CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G090500
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.010G090500
T050084_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G090500.1
bHLH
23
66
YAKVRREKISERMKYLQDLVPGCNKITDKAGMLNEIINYVQSLQ
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.002G116400
Gossypium raimondii
Gorai.002G116400
N
0.914
Gorai.004G212900
Gossypium raimondii
Gorai.004G212900
N
0.914
PDK_20s1360531g001
Phoenix dactylifera
PDK_20s1360531g001
N
0.875
ORUFI06G11220
Oryza rufipogon
ORUFI06G11220
N
0.862
PDK_20s1499141g001
Phoenix dactylifera
PDK_20s1499141g001
N
0.862
ONIVA11G11880
Oryza nivara
ONIVA11G11880
I
0.862
Aquca_005_00610
Aquilegia coerulea
Aquca_005_00610
N
0.862
OBART11G12110
Oryza barthii
OBART11G12110
N
0.862
OB08G25860
Oryza brachyantha
OB08G25860
N
0.862
ONIVA06G12430
Oryza nivara
ONIVA06G12430
N
0.862
OGLUM06G11560
Oryza glumaepatula
OGLUM06G11560
N
0.862
OGLUM11G11800
Oryza glumaepatula
OGLUM11G11800
I
0.862
MLOC_57269
Hordeum vulgare
MLOC_57269
I
0.854
TRIUR3_17846
Triticum urartu
TRIUR3_17846
N
0.854
gene00752-v1.0-hybrid
Fragaria vesca
gene00752-v1.0-hybrid
N
0.850
PGSC0003DMG401024463
Solanum tuberosum
PGSC0003DMG401024463
I
0.850
PDK_20s1475851g002
Phoenix dactylifera
PDK_20s1475851g002
N
0.842
PDK_20s1360831g001
Phoenix dactylifera
PDK_20s1360831g001
N
0.841
BGIOSGA015290
Oryza indica
BGIOSGA015290
N
0.840
Pavir.J14571
Panicum virgatum
Pavir.J14571
N
0.838
Gorai.007G241100
Gossypium raimondii
Gorai.007G241100
N
0.777
Gorai.001G193500
Gossypium raimondii
Gorai.001G193500
N
0.777
Gorai.001G223600
Gossypium raimondii
Gorai.001G223600
N
0.777
Gorai.011G117300
Gossypium raimondii
Gorai.011G117300
N
0.777