CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_000992900
(
Globodera pallida
)
Brinker
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF09607 (BrkDBD)
IPR018586
GPLIN_000992900
T055874_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_000992900
Brinker
65
116
SITSRRATKKVDIIDYAKCIGNRAAGREFNVAESSIREWRKNEEKIRRQAET
Links
Other
Brinker
family TFs
Other
Globodera pallida
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc03820
Meloidogyne incognita
Minc03820
N
0.808
Minc08655
Meloidogyne incognita
Minc08655
N
0.808
MhA1_Contig468.frz3.gene12
Meloidogyne hapla
MhA1_Contig468.frz3.gene12
N
0.808
snap_masked-nMf.1.1.scaf42701-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf42701-processed-gene-0.2
N
0.808
L892_g11291
Steinernema scapterisci
L892_g11291
N
0.706