CBN29878 (Caenorhabditis brenneri)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 CBN29878 T057979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
skn-1
M00596_2.00 		Caenorhabditis elegans
NHRTCABBNH
DNVVTGAYDN		 PBM
Narasimhan et al.(2015)
pTH9913 		0.811 0.938
skn-1
M08079_2.00 		Caenorhabditis elegans
RARATGATGAYAAWD
HWTTRTCATCATYTY		 ChIP-seq
Mathelier et al.(2014)
MA0547.1 		0.811 0.938
skn-1
M10053_2.00 		Caenorhabditis elegans
DDVATGACAWDD
HHWTGTCATBHH		 Transfac
Matys et al.(2006)
N$SKN1_01 		0.811 0.938
skn-1
M10054_2.00 		Caenorhabditis elegans
NWDWATCATBHN
NDVATGATWHWN		 Transfac
Matys et al.(2006)
N$SKN1_02 		0.811 0.938
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN29878 bZIP 222 253

Links

Other bZIP family TFs
Other Caenorhabditis brenneri TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA20487 Caenorhabditis japonica CJA20487 I 0.841
CRE13433 Caenorhabditis remanei CRE13433 I 0.841
skn-1 Caenorhabditis elegans WBGene00004804 D 0.811