CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.002G126500
(
Gossypium raimondii
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00170 (bZIP_1)
IPR011616
Gorai.002G126500
T071888_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BZIP53
M06779_2.00
Arabidopsis thaliana
DNWGMTGACGTGKCV
BGMCACGTCAKCWNH
Dap-seq
OMalley et al.(2016)
bZIP53_colamp_a
0.785
0.565
BZIP53
M06780_2.00
Arabidopsis thaliana
DDWGMTGACGTGGMV
BKCCACGTCAKCWHH
Dap-seq
OMalley et al.(2016)
bZIP53_col
0.785
0.565
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.002G126500.1
bZIP
61
122
DERKRKRMESNRESARRSRMRKQKYLDDLMAQLTLLRKDNNQILTSINFITHHYFNIEAENS
Links
Other
bZIP
family TFs
Other
Gossypium raimondii
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10002731m.g
Citrus clementina
Ciclev10002731m.g
N
0.856
orange1.1g041765m.g
Citrus sinensis
orange1.1g041765m.g
N
0.856
Eucgr.F01867
Eucalyptus grandis
Eucgr.F01867
N
0.851
Lus10024279.g
Linum usitatissimum
Lus10024279.g
N
0.846
cassava1498.valid.m1
Manihot esculenta
cassava1498.valid.m1
N
0.844
Lus10001347.g
Linum usitatissimum
Lus10001347.g
N
0.840
Cla022814
Citrullus lanatus
Cla022814
N
0.839
Cucsa.248080
Cucumis sativus
Cucsa.248080
N
0.837
mgf022473m
Mimulus guttatus
mgf022473m
N
0.835
cassava42526.valid.m1
Manihot esculenta
cassava42526.valid.m1
N
0.834
Ciclev10029834m.g
Citrus clementina
Ciclev10029834m.g
I
0.833
orange1.1g044691m.g
Citrus sinensis
orange1.1g044691m.g
I
0.833
PK06492.1
Cannabis sativa
PK06492.1
N
0.827
PGSC0003DMG400003701
Solanum tuberosum
PGSC0003DMG400003701
I
0.826
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.823
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.823
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.823
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.823
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.823
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.823
PK07533.1
Cannabis sativa
PK07533.1
I
0.823
Cla016841
Citrullus lanatus
Cla016841
I
0.822
MDP0000205823
Malus domestica
MDP0000205823
I
0.819
MDP0000239026
Malus domestica
MDP0000239026
I
0.819
AMTR_s00014p00097990
Amborella trichopoda
AMTR_s00014p00097990
N
0.818
Cla014262
Citrullus lanatus
Cla014262
N
0.818
Cucsa.103380
Cucumis sativus
Cucsa.103380
N
0.818
POPTR_0004s16560
Populus trichocarpa
POPTR_0004s16560
I
0.814
Cucsa.109420
Cucumis sativus
Cucsa.109420
I
0.811
Cucsa.043170
Cucumis sativus
Cucsa.043170
N
0.809
GLYMA10G01640
Glycine max
GLYMA10G01640
N
0.805
30131.m007078
Ricinus communis
30131.m007078
I
0.805
cassava24775.valid.m1
Manihot esculenta
cassava24775.valid.m1
I
0.805
POPTR_0009s12250
Populus trichocarpa
POPTR_0009s12250
I
0.804
mgf018581m
Mimulus guttatus
mgf018581m
I
0.804
GSMUA_Achr1G12710_001
Musa acuminata
GSMUA_Achr1G12710_001
I
0.801
Sb07g015450
Sorghum bicolor
Sb07g015450
N
0.801
Si014523m.g
Setaria italica
Si014523m.g
N
0.801
GSMUA_Achr4G03790_001
Musa acuminata
GSMUA_Achr4G03790_001
I
0.799
SapurV1A.0396s0080
Salix purpurea
SapurV1A.0396s0080
I
0.798
gene02284-v1.0-hybrid
Fragaria vesca
gene02284-v1.0-hybrid
N
0.796
Gorai.008G065300
Gossypium raimondii
Gorai.008G065300
I
0.795
mgf003466m
Mimulus guttatus
mgf003466m
I
0.794
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.790
Bo6g079450
Brassica oleracea
Bo6g079450
I
0.786
Bra003500
Brassica rapa
Bra003500
I
0.786
Solyc02g092090.1
Solanum lycopersicum
Solyc02g092090.1
I
0.786
Lus10040428.g
Linum usitatissimum
Lus10040428.g
I
0.786
Thhalv10006418m.g
Eutrema salsugineum
Thhalv10006418m.g
I
0.786
BZIP53
Arabidopsis thaliana
AT3G62420
D
0.785
ATBZIP53
Arabidopsis lyrata
fgenesh2_kg.5__2740__AT3G62420.1
I
0.785
Cagra.0483s0006
Capsella grandiflora
Cagra.0483s0006
I
0.785
Carubv10018852m.g
Capsella rubella
Carubv10018852m.g
I
0.785
Bra039631
Brassica rapa
Bra039631
I
0.784
VIT_07s0005g01450
Vitis vinifera
VIT_07s0005g01450
N
0.784
Gorai.001G144200
Gossypium raimondii
Gorai.001G144200
I
0.784
Bo8g097830
Brassica oleracea
Bo8g097830
I
0.783
Bra007679
Brassica rapa
Bra007679
I
0.783
GLYMA02G01600
Glycine max
GLYMA02G01600
N
0.783
PGSC0003DMG400021431
Solanum tuberosum
PGSC0003DMG400021431
I
0.783
PGSC0003DMG400022589
Solanum tuberosum
PGSC0003DMG400022589
I
0.782
cassava40461.m1
Manihot esculenta
cassava40461.m1
I
0.782