Pavir.J00385 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J00385 T072431_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP17
M01778_2.00 		Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN		 PBM
Weirauch et al.(2014)
pTH7221 		0.834 0.797
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J00385.1.p bZIP 174 238

Links

Other bZIP family TFs
Other Panicum virgatum TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018059 Oryza indica BGIOSGA018059 I 0.888
GRMZM2G045236 Zea mays GRMZM2G045236 I 0.888
LPERR05G13000 Leersia perrieri LPERR05G13000 I 0.888
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I 0.888
ONIVA05G17010 Oryza nivara ONIVA05G17010 I 0.888
OPUNC05G14460 Oryza punctata OPUNC05G14460 I 0.888
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I 0.888
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I 0.888
BZIP39 Oryza sativa OS05G0411300 I 0.888
Si021442m.g Setaria italica Si021442m.g I 0.888
Sb09g020320 Sorghum bicolor Sb09g020320 I 0.876
Pavir.J18543 Panicum virgatum Pavir.J18543 I 0.870
OB05G24300 Oryza brachyantha OB05G24300 I 0.864
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.862
29940.m000398 Ricinus communis 29940.m000398 I 0.845
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.845
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.843
Ca_08103 Cicer arietinum Ca_08103 I 0.843
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.841
F775_10026 Aegilops tauschii F775_10026 I 0.838
MLOC_42759 Hordeum vulgare MLOC_42759 I 0.838
TRIUR3_02784 Triticum urartu TRIUR3_02784 I 0.838
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.836
TCM_023889 Theobroma cacao TCM_023889 I 0.835
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.835
BZIP17 Arabidopsis thaliana AT2G40950 D 0.834
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.834
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.834
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.834
Carubv10022722m.g Capsella rubella Carubv10022722m.g I 0.834
Lus10010440.g Linum usitatissimum Lus10010440.g I 0.834
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.834
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.834
Cla017717 Citrullus lanatus Cla017717 I 0.829
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.829
Bra016959 Brassica rapa Bra016959 I 0.825
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I 0.825
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.824
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.822
Pm016493 Prunus mume Pm016493 I 0.822
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.822
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.822
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.821
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.818
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.817
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.817
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.815
mgf013640m Mimulus guttatus mgf013640m I 0.811
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.810
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.810
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.810
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.809
Bo4g012880 Brassica oleracea Bo4g012880 I 0.807
Bo4g190610 Brassica oleracea Bo4g190610 I 0.807
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.807
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.807
MDP0000180785 Malus domestica MDP0000180785 I 0.807
MDP0000270677 Malus domestica MDP0000270677 I 0.807
PK07115.1 Cannabis sativa PK07115.1 I 0.807
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.806
mgf002378m Mimulus guttatus mgf002378m I 0.806
MDP0000138811 Malus domestica MDP0000138811 I 0.804
MDP0000299504 Malus domestica MDP0000299504 I 0.804
GSMUA_Achr3G24960_001 Musa acuminata GSMUA_Achr3G24960_001 I 0.799
SapurV1A.1072s0100 Salix purpurea SapurV1A.1072s0100 I 0.799
e_gw1.25.198.1 Physcomitrella patens e_gw1.25.198.1 I 0.797
cassava24522.valid.m1 Manihot esculenta cassava24522.valid.m1 I 0.795
PGSC0003DMG400007175 Solanum tuberosum PGSC0003DMG400007175 I 0.793
Solyc10g078290.1 Solanum lycopersicum Solyc10g078290.1 I 0.793
gw1.158.68.1 Physcomitrella patens gw1.158.68.1 I 0.790
BZIP49 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001722 I 0.784
OB07G29670 Oryza brachyantha OB07G29670 I 0.784
Thhalv10005827m.g Eutrema salsugineum Thhalv10005827m.g I 0.783
OBART05G16350 Oryza barthii OBART05G16350 N 0.782
OLONG_003427 Oryza longistaminata OLONG_003427 N 0.782