Pavir.J18543 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J18543 T072470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP17
M01778_2.00 		Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN		 PBM
Weirauch et al.(2014)
pTH7221 		0.815 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18543.1.p bZIP 174 238

Links

Other bZIP family TFs
Other Panicum virgatum TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA018059 Oryza indica BGIOSGA018059 I 0.870
GRMZM2G045236 Zea mays GRMZM2G045236 I 0.870
LPERR05G13000 Leersia perrieri LPERR05G13000 I 0.870
OGLUM05G17320 Oryza glumaepatula OGLUM05G17320 I 0.870
ONIVA05G17010 Oryza nivara ONIVA05G17010 I 0.870
OPUNC05G14460 Oryza punctata OPUNC05G14460 I 0.870
ORGLA05G0141100 Oryza glaberrima ORGLA05G0141100 I 0.870
ORUFI05G17550 Oryza rufipogon ORUFI05G17550 I 0.870
BZIP39 Oryza sativa OS05G0411300 I 0.870
Si021442m.g Setaria italica Si021442m.g I 0.870
Pavir.J00385 Panicum virgatum Pavir.J00385 I 0.870
Sb09g020320 Sorghum bicolor Sb09g020320 I 0.858
OB05G24300 Oryza brachyantha OB05G24300 I 0.846
BRADI2G25400 Brachypodium distachyon BRADI2G25400 I 0.843
29940.m000398 Ricinus communis 29940.m000398 I 0.826
chr1.CM0269.100.nd Lotus japonicus chr1.CM0269.100.nd I 0.826
MTR_7g088890 Medicago truncatula MTR_7g088890 I 0.825
Ca_08103 Cicer arietinum Ca_08103 I 0.825
gene03633-v1.0-hybrid Fragaria vesca gene03633-v1.0-hybrid I 0.823
F775_10026 Aegilops tauschii F775_10026 I 0.820
MLOC_42759 Hordeum vulgare MLOC_42759 I 0.820
TRIUR3_02784 Triticum urartu TRIUR3_02784 I 0.820
evm.TU.supercontig_92.68 Carica papaya evm.TU.supercontig_92.68 I 0.818
TCM_023889 Theobroma cacao TCM_023889 I 0.817
Aquca_009_00077 Aquilegia coerulea Aquca_009_00077 I 0.817
BZIP17 Arabidopsis thaliana AT2G40950 D 0.815
BZIP17 Arabidopsis lyrata scaffold_402899.1 I 0.815
Bostr.9345s0037 Boechera stricta Bostr.9345s0037 I 0.815
Cagra.1642s0060 Capsella grandiflora Cagra.1642s0060 I 0.815
Carubv10022722m.g Capsella rubella Carubv10022722m.g I 0.815
Lus10010440.g Linum usitatissimum Lus10010440.g I 0.815
Lus10012104.g Linum usitatissimum Lus10012104.g I 0.815
Thhalv10016317m.g Eutrema salsugineum Thhalv10016317m.g I 0.815
Cla017717 Citrullus lanatus Cla017717 I 0.811
Cucsa.337510 Cucumis sativus Cucsa.337510 I 0.811
Bra016959 Brassica rapa Bra016959 I 0.807
GSMUA_Achr11G25190_001 Musa acuminata GSMUA_Achr11G25190_001 I 0.807
POPTR_0006s03300 Populus trichocarpa POPTR_0006s03300 I 0.805
PRUPE_ppa002181mg Prunus persica PRUPE_ppa002181mg I 0.804
Pm016493 Prunus mume Pm016493 I 0.804
Ciclev10011169m.g Citrus clementina Ciclev10011169m.g I 0.804
orange1.1g035544m.g Citrus sinensis orange1.1g035544m.g I 0.804
SapurV1A.0159s0210 Salix purpurea SapurV1A.0159s0210 I 0.803
GSMUA_Achr10G01440_001 Musa acuminata GSMUA_Achr10G01440_001 I 0.800
Lus10027290.g Linum usitatissimum Lus10027290.g I 0.799
Lus10038995.g Linum usitatissimum Lus10038995.g I 0.799
Gorai.013G000800 Gossypium raimondii Gorai.013G000800 I 0.797
POPTR_0016s03220 Populus trichocarpa POPTR_0016s03220 I 0.792
mgf013640m Mimulus guttatus mgf013640m I 0.792
AMTR_s00101p00121930 Amborella trichopoda AMTR_s00101p00121930 I 0.791
VIT_08s0040g00870 Vitis vinifera VIT_08s0040g00870 I 0.791
Eucgr.A02199 Eucalyptus grandis Eucgr.A02199 I 0.791
Bo4g012880 Brassica oleracea Bo4g012880 I 0.789
Bo4g190610 Brassica oleracea Bo4g190610 I 0.789
GLYMA19G30681 Glycine max GLYMA19G30681 I 0.789
MDP0000180785 Malus domestica MDP0000180785 I 0.789
MDP0000270677 Malus domestica MDP0000270677 I 0.789
PK07115.1 Cannabis sativa PK07115.1 I 0.789
cassava31134.valid.m1 Manihot esculenta cassava31134.valid.m1 I 0.788
mgf002378m Mimulus guttatus mgf002378m I 0.788
GLYMA03G27865 Glycine max GLYMA03G27865 I 0.787
MDP0000138811 Malus domestica MDP0000138811 I 0.786
MDP0000299504 Malus domestica MDP0000299504 I 0.786