CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZAT12
(
Arabidopsis thaliana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AT5G59820
T080887_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT12
M01859_2.00
Arabidopsis thaliana
NNHASWN
NWSTDNN
PBM
Weirauch et al.(2014)
pTH7184
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01859_2.00
C2H2 ZF
51
73
HPCPICGVEFPMGQALGGHMRRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G59820.1
C2H2 ZF
82
104
HPCPICGVEFPMGQALGGHMRRH
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis thaliana
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bra002528
Brassica rapa
Bra002528
I
0.827
Carubv10027055m.g
Capsella rubella
Carubv10027055m.g
I
0.827
MLOC_42254
Hordeum vulgare
MLOC_42254
I
0.764