Carubv10027055m.g (Capsella rubella)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Carubv10027055m.g T142748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT12
M01859_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7184 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10027055m C2H2 ZF 151 173

Links

Other C2H2 ZF family TFs
Other Capsella rubella TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZAT12 Arabidopsis thaliana AT5G59820 D 0.827
Bra002528 Brassica rapa Bra002528 I 0.827
MLOC_42254 Hordeum vulgare MLOC_42254 I 0.764