Bra008004 (Brassica rapa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bra008004 T081898_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008004.1-P C2H2 ZF 35 58
Bra008004.1-P C2H2 ZF 82 104
Bra008004.1-P C2H2 ZF 110 134
Bra008004.1-P C2H2 ZF 139 164
Bra008004.1-P C2H2 ZF 199 223
Bra008004.1-P C2H2 ZF 232 256
Bra008004.1-P C2H2 ZF 290 315

Links

Other C2H2 ZF family TFs
Other Brassica rapa TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TFIIIA Arabidopsis lyrata fgenesh2_kg.2__1466__AT1G72050.2 N 0.803
Thhalv10018661m.g Eutrema salsugineum Thhalv10018661m.g N 0.803
Bostr.10273s0148 Boechera stricta Bostr.10273s0148 N 0.797
Cagra.4006s0023 Capsella grandiflora Cagra.4006s0023 N 0.789
Carubv10022259m.g Capsella rubella Carubv10022259m.g N 0.789
Bra003899 Brassica rapa Bra003899 N 0.782