TFIIIA (Arabidopsis lyrata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh2_kg.2__1466__AT1G72050.2 T117351_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 20 43
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 66 88
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 94 118
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 123 148
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 195 219
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 228 252
fgenesh2_kg.2__1466__AT1G72050.2 C2H2 ZF 285 310

Links

Other C2H2 ZF family TFs
Other Arabidopsis lyrata TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.10273s0148 Boechera stricta Bostr.10273s0148 N 0.814
Carubv10022259m.g Capsella rubella Carubv10022259m.g N 0.813
Cagra.4006s0023 Capsella grandiflora Cagra.4006s0023 N 0.813
Bra008004 Brassica rapa Bra008004 N 0.803
Thhalv10018661m.g Eutrema salsugineum Thhalv10018661m.g N 0.795
Bra003899 Brassica rapa Bra003899 N 0.785