CBG04163 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG04163 T082885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
C55C2.1_CONSTRUCT
M00649_2.00 		PBM CONSTRUCTS
NHYDHHNNN
NNNDDHRDN		 PBM
Narasimhan et al.(2015)
pTH10623 		0.808 0.926
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG04163 C2H2 ZF 101 123
CBG04163 C2H2 ZF 129 151
CBG04163 C2H2 ZF 157 178

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE30071 Caenorhabditis remanei CRE30071 I 0.811
C55C2.1_CONSTRUCT PBM CONSTRUCTS C55C2.1_CONSTRUCT D 0.808
scrt-1 Caenorhabditis elegans WBGene00016948 I 0.808
CJA18229 Caenorhabditis japonica CJA18229 I 0.773
SMUV_0000156601 Syphacia muris SMUV_0000156601 I 0.765
OESDEN_06135 Oesophagostomum dentatum OESDEN_06135 I 0.757