CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SMUV_0000156601 *(Syphacia muris)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	SMUV_0000156601	T156418_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
C55C2.1_CONSTRUCT M00649_2.00	PBM CONSTRUCTS	NHYDHHNNN	NNNDDHRDN	PBM Narasimhan et al.(2015) pTH10623	0.761	0.809
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Syphacia muris* TFs

19 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
OESDEN_06135	Oesophagostomum dentatum	OESDEN_06135	I	0.781
L596_g21013	Steinernema carpocapsae	L596_g21013	N	0.778
L892_g12756	Steinernema scapterisci	L892_g12756	N	0.778
PTRK_0001695200	Parastrongyloides trichosuri	PTRK_0001695200	N	0.769
SPAL_0000568700	Strongyloides papillosus	SPAL_0000568700	N	0.769
SSTP_0000185400	Strongyloides stercoralis	SSTP_0000185400	N	0.769
SVE_0408900	Strongyloides venezuelensis	SVE_0408900	N	0.769
TCLT_0000703901	Thelazia callipaeda	TCLT_0000703901	I	0.769
WUBG_05161	Wuchereria bancrofti	WUBG_05161	I	0.765
CBG04163	Caenorhabditis briggsae	CBG04163	I	0.765
CRE30071	Caenorhabditis remanei	CRE30071	I	0.765
WBGene00245863	Onchocerca volvulus	WBGene00245863	I	0.765
BXY_0687500	Bursaphelenchus xylophilus	BXY_0687500	N	0.765
nLs.2.1.2.g04589	Litomosoides sigmodontis	nLs.2.1.2.g04589	I	0.765
nOo.2.0.1.g09798	Onchocerca ochengi	nOo.2.0.1.g09798	I	0.765
L889_g2035	Steinernema feltiae	L889_g2035	N	0.764
scrt-1	Caenorhabditis elegans	WBGene00016948	I	0.761
C55C2.1_CONSTRUCT	PBM CONSTRUCTS	C55C2.1_CONSTRUCT	D	0.761
EEL_0000427701	Elaeophora elaphi	EEL_0000427701	I	0.761