CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0408900
(
Strongyloides venezuelensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SVE_0408900
T157402_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0408900.1
C2H2 ZF
132
154
CSCPICGKGFSRHWLLQGHIRTH
SVE_0408900.1
C2H2 ZF
160
182
FKCTICKKAFADKSNLRAHIQTH
SVE_0408900.1
C2H2 ZF
188
209
FECHRCGKRFALKSYLSKHEES
Links
Other
C2H2 ZF
family TFs
Other
Strongyloides venezuelensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPAL_0000568700
Strongyloides papillosus
SPAL_0000568700
N
0.827
SSTP_0000185400
Strongyloides stercoralis
SSTP_0000185400
N
0.827
PTRK_0001695200
Parastrongyloides trichosuri
PTRK_0001695200
N
0.801
BXY_0687500
Bursaphelenchus xylophilus
BXY_0687500
N
0.784
L596_g21013
Steinernema carpocapsae
L596_g21013
N
0.778
L892_g12756
Steinernema scapterisci
L892_g12756
N
0.778
SMUV_0000156601
Syphacia muris
SMUV_0000156601
I
0.769
TCLT_0000703901
Thelazia callipaeda
TCLT_0000703901
I
0.769
L889_g2035
Steinernema feltiae
L889_g2035
N
0.767
WUBG_05161
Wuchereria bancrofti
WUBG_05161
I
0.765
WBGene00245863
Onchocerca volvulus
WBGene00245863
I
0.765
nLs.2.1.2.g04589
Litomosoides sigmodontis
nLs.2.1.2.g04589
I
0.765
nOo.2.0.1.g09798
Onchocerca ochengi
nOo.2.0.1.g09798
I
0.765
OESDEN_06135
Oesophagostomum dentatum
OESDEN_06135
I
0.765
EEL_0000427701
Elaeophora elaphi
EEL_0000427701
I
0.761