CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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patz1
(
Gasterosteus aculeatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGACG00000001483
T095522_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000001925
C2H2 ZF
348
368
CDICGKVFRDVYHLNRHKLSH
ENSGACP00000001925
C2H2 ZF
374
396
YACHVCGLRFKRKDRMSYHVRSH
ENSGACP00000001925
C2H2 ZF
404
428
YVCQSCGKGFSRRPDHLNGHIKQVH
ENSGACP00000001925
C2H2 ZF
434
456
HKCQICNASFATRDRLRSHLACH
ENSGACP00000001925
C2H2 ZF
460
481
IPCKVCGKFLRAAYMTDHLKKH
ENSGACP00000001925
C2H2 ZF
488
510
YCGICNKGFSTASYLKVHIKTHH
Links
Other
C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000004248
Oreochromis niloticus
ENSONIG00000004248
N
0.827
patz1
Takifugu rubripes
ENSTRUG00000015366
N
0.825
ENSXMAG00000015531
Xiphophorus maculatus
ENSXMAG00000015531
N
0.825
ENSGMOG00000001062
Gadus morhua
ENSGMOG00000001062
N
0.814