CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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patz1
(
Takifugu rubripes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTRUG00000015366
T112450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000039269
C2H2 ZF
342
362
CEICGKVFRDVYHLNRHKLSH
ENSTRUP00000039269
C2H2 ZF
368
390
YACHVCGLRFKRKDRMSYHVRSH
ENSTRUP00000039269
C2H2 ZF
398
421
YVCQSCGKGFSRPDHLNGHIKQVH
ENSTRUP00000039269
C2H2 ZF
427
449
HKCQICNASFATRDRLRSHLACH
ENSTRUP00000039269
C2H2 ZF
453
474
IPCKVCGKFLRAAYMTDHLKKH
ENSTRUP00000039269
C2H2 ZF
481
503
YCGICNKGFSTASYLKVHIKTHH
ENSTRUP00000039270
C2H2 ZF
342
362
CEICGKVFRDVYHLNRHKLSH
ENSTRUP00000039270
C2H2 ZF
368
390
YACHVCGLRFKRKDRMSYHVRSH
ENSTRUP00000039270
C2H2 ZF
398
421
YVCQSCGKGFSRPDHLNGHIKQVH
ENSTRUP00000039270
C2H2 ZF
427
449
HKCQICNASFATRDRLRSHLACH
ENSTRUP00000039270
C2H2 ZF
453
474
IPCKVCGKFLRAAYMTDHLKKH
ENSTRUP00000039271
C2H2 ZF
342
362
CEICGKVFRDVYHLNRHKLSH
ENSTRUP00000039271
C2H2 ZF
368
390
YACHVCGLRFKRKDRMSYHVRSH
ENSTRUP00000039272
C2H2 ZF
265
285
CEICGKVFRDVYHLNRHKLSH
ENSTRUP00000039272
C2H2 ZF
291
313
YACHVCGLRFKRKDRMSYHVRSH
ENSTRUP00000039272
C2H2 ZF
321
344
YVCQSCGKGFSRPDHLNGHIKQVH
ENSTRUP00000039272
C2H2 ZF
350
372
HKCQICNASFATRDRLRSHLACH
ENSTRUP00000039272
C2H2 ZF
376
397
IPCKVCGKFLRAAYMTDHLKKH
Links
Other
C2H2 ZF
family TFs
Other
Takifugu rubripes
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
patz1
Gasterosteus aculeatus
ENSGACG00000001483
N
0.825
ENSONIG00000004248
Oreochromis niloticus
ENSONIG00000004248
N
0.825
patz1
Tetraodon nigroviridis
ENSTNIG00000014714
N
0.825
ENSXMAG00000015531
Xiphophorus maculatus
ENSXMAG00000015531
N
0.824
ENSPFOG00000018058
Poecilia formosa
ENSPFOG00000018058
N
0.823
ENSGMOG00000001062
Gadus morhua
ENSGMOG00000001062
N
0.812