CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGMOG00000011797
(
Gadus morhua
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGMOG00000011797
T096829_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.824
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGMOP00000012620
C2H2 ZF
244
266
MRCVICHRGFNSRSNLRSHMRIH
ENSGMOP00000012620
C2H2 ZF
272
294
FVCRFCNRRFSQSSTLRNHVRLH
ENSGMOP00000012620
C2H2 ZF
300
324
YKCHVCQSAYSQLAGLRAHQKSARH
ENSGMOP00000012626
C2H2 ZF
247
269
MRCVICHRGFNSRSNLRSHMRIH
ENSGMOP00000012626
C2H2 ZF
275
297
FVCRFCNRRFSQSSTLRNHVRLH
ENSGMOP00000012626
C2H2 ZF
303
327
YKCHVCQSAYSQLAGLRAHQKSARH
Links
Other
C2H2 ZF
family TFs
Other
Gadus morhua
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000007663
Astyanax mexicanus
ENSAMXG00000007663
I
0.827
ENSAMXG00000008540
Astyanax mexicanus
ENSAMXG00000008540
I
0.827
prdm12b
Danio rerio
ENSDARG00000007430
I
0.827
prdm12b
Gasterosteus aculeatus
ENSGACG00000016713
I
0.827
ENSLOCG00000005429
Lepisosteus oculatus
ENSLOCG00000005429
I
0.827
ENSONIG00000002871
Oreochromis niloticus
ENSONIG00000002871
I
0.827
prdm12b
Oryzias latipes
ENSORLG00000007114
I
0.827
ENSORLG00000017558
Oryzias latipes
ENSORLG00000017558
I
0.827
ENSPFOG00000019841
Poecilia formosa
ENSPFOG00000019841
I
0.827
ENSTNIG00000005859
Tetraodon nigroviridis
ENSTNIG00000005859
I
0.827
ENSTRUG00000013239
Takifugu rubripes
ENSTRUG00000013239
I
0.827
ENSXMAG00000005537
Xiphophorus maculatus
ENSXMAG00000005537
I
0.827
ENSAMEG00000016234
Ailuropoda melanoleuca
ENSAMEG00000016234
I
0.824
ENSAPLG00000012403
Anas platyrhynchos
ENSAPLG00000012403
I
0.824
PRDM12
Bos taurus
ENSBTAG00000023797
I
0.824
PRDM12
Canis familiaris
ENSCAFG00000023076
I
0.824
ENSCSAG00000014756
Chlorocebus sabaeus
ENSCSAG00000014756
I
0.824
PRDM12
Dasypus novemcinctus
ENSDNOG00000042302
I
0.824
ENSFALG00000001445
Ficedula albicollis
ENSFALG00000001445
I
0.824
PRDM12
Homo sapiens
ENSG00000130711
D
0.824
PRDM12
Gallus gallus
ENSGALG00000003895
I
0.824
ENSLACG00000017560
Latimeria chalumnae
ENSLACG00000017560
I
0.824
PRDM12
Loxodonta africana
ENSLAFG00000006979
I
0.824
ENSMEUG00000003828
Macropus eugenii
ENSMEUG00000003828
I
0.824
PRDM12
Meleagris gallopavo
ENSMGAG00000005438
I
0.824
PRDM12
Microcebus murinus
ENSMICG00000015480
I
0.824
PRDM12
Monodelphis domestica
ENSMODG00000012108
I
0.824
Prdm12
Mus musculus
ENSMUSG00000079466
I
0.824
ENSOANG00000001043
Ornithorhynchus anatinus
ENSOANG00000001043
I
0.824
PRDM12
Oryctolagus cuniculus
ENSOCUG00000008241
I
0.824
PRDM12
Otolemur garnettii
ENSOGAG00000007557
I
0.824
PRDM12
Ochotona princeps
ENSOPRG00000008680
I
0.824
ENSPANG00000025967
Papio anubis
ENSPANG00000025967
I
0.824
ENSPPYG00000019694
Pongo abelii
ENSPPYG00000019694
I
0.824
ENSPSIG00000006739
Pelodiscus sinensis
ENSPSIG00000006739
I
0.824
PRDM12
Pan troglodytes
ENSPTRG00000021475
I
0.824
PRDM12
Pteropus vampyrus
ENSPVAG00000001511
I
0.824
Prdm12
Rattus norvegicus
ENSRNOG00000009218
I
0.824
ENSSHAG00000015972
Sarcophilus harrisii
ENSSHAG00000015972
I
0.824
PRDM12
Sus scrofa
ENSSSCG00000005703
I
0.824
ENSSTOG00000005986
Ictidomys tridecemlineatus
ENSSTOG00000005986
I
0.824
prdm12b
Takifugu rubripes
ENSTRUG00000018659
I
0.824
Alligator_sinensis_CCG011983.1
Alligator sinensis
Alligator_sinensis_CCG011983.1
I
0.824
Ogr15453
Ophisaurus gracilis
Ogr15453
I
0.824
Pvit_04639
Pogona vitticeps
Pvit_04639
I
0.824
prdm12
Xenopus tropicalis
XB-GENE-953729
I
0.824
prdm12.L
Xenopus laevis
XB-GENE-953734
I
0.824
Sakowv30035316m.g
Saccoglossus kowalevskii
Sakowv30035316m.g
I
0.812
CGI_10016801
Crassostrea gigas
CGI_10016801
I
0.792
NEMVEDRAFT_v1g119550
Nematostella vectensis
NEMVEDRAFT_v1g119550
I
0.780
TriadG14897
Trichoplax adhaerens
TriadG14897
I
0.780
Ocbimv22004421m.g
Octopus bimaculoides
Ocbimv22004421m.g
I
0.778
LotgiG130157
Lottia gigantea
LotgiG130157
I
0.777
fgenesh2_pg.scaffold_504000008
Branchiostoma floridae
fgenesh2_pg.scaffold_504000008
I
0.764
gw.504.9.1
Branchiostoma floridae
gw.504.9.1
I
0.764