PRDM5 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000006532 T097278_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm5
M08986_2.00 		Mus musculus
DCCHBSHBCTCCHKB
VMDGGAGVDSVDGGH		 Misc
Kulakovskiy et al.(2013)
PRDM5_MOUSE.H11MO.0.A 		0.771 0.942
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000005482 C2H2 ZF 167 190
ENSLAFP00000005482 C2H2 ZF 199 221
ENSLAFP00000005482 C2H2 ZF 231 256
ENSLAFP00000005482 C2H2 ZF 264 286
ENSLAFP00000005482 C2H2 ZF 289 311
ENSLAFP00000005482 C2H2 ZF 317 339
ENSLAFP00000005482 C2H2 ZF 345 367
ENSLAFP00000005482 C2H2 ZF 373 395
ENSLAFP00000005482 C2H2 ZF 401 424
ENSLAFP00000005482 C2H2 ZF 430 452
ENSLAFP00000005482 C2H2 ZF 459 480
ENSLAFP00000005482 C2H2 ZF 486 508
ENSLAFP00000005482 C2H2 ZF 514 536
ENSLAFP00000005482 C2H2 ZF 542 564
ENSLAFP00000005482 C2H2 ZF 572 594
ENSLAFP00000028332 C2H2 ZF 7 29
ENSLAFP00000028332 C2H2 ZF 35 60
ENSLAFP00000028332 C2H2 ZF 65 85
ENSLAFP00000028332 C2H2 ZF 91 113
ENSLAFP00000028332 C2H2 ZF 119 142
ENSLAFP00000028332 C2H2 ZF 148 170
ENSLAFP00000028332 C2H2 ZF 177 198
ENSLAFP00000028332 C2H2 ZF 204 226
ENSLAFP00000028332 C2H2 ZF 232 254
ENSLAFP00000028332 C2H2 ZF 260 282
ENSLAFP00000028332 C2H2 ZF 290 312

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000003729 Chlorocebus sabaeus ENSCSAG00000003729 I 0.792
PRDM5 Homo sapiens ENSG00000138738 I 0.792
ENSNLEG00000009107 Nomascus leucogenys ENSNLEG00000009107 I 0.792
PRDM5 Callithrix jacchus ENSCJAG00000003133 I 0.790
PRDM5 Pteropus vampyrus ENSPVAG00000012309 I 0.782
Prdm5 Mus musculus ENSMUSG00000029913 D 0.771
ENSAMEG00000003050 Ailuropoda melanoleuca ENSAMEG00000003050 N 0.765