PRDM5 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000012309 T108698_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Prdm5
M08986_2.00 		Mus musculus
DCCHBSHBCTCCHKB
VMDGGAGVDSVDGGH		 Misc
Kulakovskiy et al.(2013)
PRDM5_MOUSE.H11MO.0.A 		0.770 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000011602 C2H2 ZF 136 159
ENSPVAP00000011602 C2H2 ZF 168 189
ENSPVAP00000011602 C2H2 ZF 231 256
ENSPVAP00000011602 C2H2 ZF 264 286
ENSPVAP00000011602 C2H2 ZF 289 311
ENSPVAP00000011602 C2H2 ZF 317 339
ENSPVAP00000011602 C2H2 ZF 345 367
ENSPVAP00000011602 C2H2 ZF 373 395
ENSPVAP00000011602 C2H2 ZF 401 424
ENSPVAP00000011602 C2H2 ZF 430 452
ENSPVAP00000011602 C2H2 ZF 458 480
ENSPVAP00000011602 C2H2 ZF 486 508
ENSPVAP00000011602 C2H2 ZF 514 536
ENSPVAP00000011602 C2H2 ZF 542 564
ENSPVAP00000011602 C2H2 ZF 572 594

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRDM5 Loxodonta africana ENSLAFG00000006532 I 0.782
ENSCSAG00000003729 Chlorocebus sabaeus ENSCSAG00000003729 I 0.780
PRDM5 Homo sapiens ENSG00000138738 I 0.780
ENSNLEG00000009107 Nomascus leucogenys ENSNLEG00000009107 I 0.780
PRDM5 Callithrix jacchus ENSCJAG00000003133 I 0.776
Prdm5 Mus musculus ENSMUSG00000029913 D 0.770