CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zscan4f
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000070828
T101443_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zscan4c
M00147_2.00
Mus musculus
NNTGTGCNN
NNGCACANN
PBM
Badis et al.(2009)
Gm397_1753
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000089014
C2H2 ZF
395
417
YKCEECSRMFKHARSLSSHQRTH
ENSMUSP00000089014
C2H2 ZF
425
446
LCVTCQKMFKRVSDRRTHEIIH
ENSMUSP00000089014
C2H2 ZF
452
474
FKCSTCEKSFSHKTNLKSHEMIH
ENSMUSP00000089014
C2H2 ZF
480
503
YVCSLCSRRFRQSSTYHRHLRNYH
ENSMUSP00000120149
C2H2 ZF
395
417
YKCEECSRMFKHARSLSSHQRTH
ENSMUSP00000120149
C2H2 ZF
425
446
LCVTCQKMFKRVSDRRTHEIIH
ENSMUSP00000120149
C2H2 ZF
452
474
FKCSTCEKSFSHKTNLKSHEMIH
ENSMUSP00000120149
C2H2 ZF
480
503
YVCSLCSRRFRQSSTYHRHLRNYH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zscan4c
Mus musculus
ENSMUSG00000054272
D
0.827
Zscan4d
Mus musculus
ENSMUSG00000090714
I
0.827
Zscan4b
Mus musculus
ENSMUSG00000095339
I
0.778