CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zscan4b
(
Mus musculus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMUSG00000095339
T101588_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zscan4c
M00147_2.00
Mus musculus
NNTGTGCNN
NNGCACANN
PBM
Badis et al.(2009)
Gm397_1753
0.778
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMUSP00000127301
C2H2 ZF
394
416
YKCEECSRMFKHARSLSSHQRTH
ENSMUSP00000127301
C2H2 ZF
425
445
CITCQKIFKRVSDLRTHEIIH
ENSMUSP00000127301
C2H2 ZF
451
473
FKCSTCEKSFSHKTNLKYHEMIH
ENSMUSP00000127301
C2H2 ZF
479
502
YVCSLCSRRFRQSSTYHRHLRNYH
Links
Other
C2H2 ZF
family TFs
Other
Mus musculus
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Zscan4c
Mus musculus
ENSMUSG00000054272
D
0.778
Zscan4f
Mus musculus
ENSMUSG00000070828
I
0.778
Zscan4d
Mus musculus
ENSMUSG00000090714
I
0.778