Zscan4b (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000095339 T101588_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within embryo implantation. Orthologous to human ZSCAN4 (zinc finger and SCAN domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zscan4c
M00147_2.00 		Mus musculus
NNTGTGCNN
NNGCACANN		 PBM
Badis et al.(2009)
Gm397_1753 		0.778 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000127301 C2H2 ZF 394 416
ENSMUSP00000127301 C2H2 ZF 425 445
ENSMUSP00000127301 C2H2 ZF 451 473
ENSMUSP00000127301 C2H2 ZF 479 502

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zscan4d Mus musculus ENSMUSG00000090714 I 0.778
Zscan4f Mus musculus ENSMUSG00000070828 I 0.778
Zscan4c Mus musculus ENSMUSG00000054272 D 0.778