AABR07025825.1 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000032977 T109198_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp42
M09006_2.00 		Mus musculus
VGSMGCCATYTT
AARATGGCKSCB		 Misc
Kulakovskiy et al.(2013)
ZFP42_MOUSE.H11MO.0.A 		0.827 0.967
Zfp42
M10351_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REX1_01 		0.827 0.967
Zfp42
M10352_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REX1_02 		0.827 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000039049 C2H2 ZF 164 188
ENSRNOP00000039049 C2H2 ZF 193 215
ENSRNOP00000039049 C2H2 ZF 221 245
ENSRNOP00000039049 C2H2 ZF 251 275

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp42 Mus musculus ENSMUSG00000051176 D 0.827
Zfp42l Rattus norvegicus ENSRNOG00000033956 I 0.817