Zfp42l (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000033956 T109212_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp42
M09006_2.00 		Mus musculus
VGSMGCCATYTT
AARATGGCKSCB		 Misc
Kulakovskiy et al.(2013)
ZFP42_MOUSE.H11MO.0.A 		0.817 0.957
Zfp42
M10351_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REX1_01 		0.817 0.957
Zfp42
M10352_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$REX1_02 		0.817 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000046100 C2H2 ZF 166 190
ENSRNOP00000046100 C2H2 ZF 195 217
ENSRNOP00000046100 C2H2 ZF 223 247
ENSRNOP00000046100 C2H2 ZF 253 277

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp42 Mus musculus ENSMUSG00000051176 D 0.817
AABR07025825.1 Rattus norvegicus ENSRNOG00000032977 I 0.817