CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GG13168
(
Drosophila erecta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0105440
T115046_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
jim
M06123_2.00
Drosophila melanogaster
BKKNNKTTTTKTTKB
VMAAMAAAAMNNMMV
B1H
Zhu et al.(2011)
jim_F1-9_SOLEXA_2.5_FBgn0027339
0.827
1.000
jim
M06124_2.00
Drosophila melanogaster
TSKTTTTTTTT
AAAAAAAAMSA
B1H
Zhu et al.(2011)
jim_SANGER_2.5_FBgn0027339
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0131714
C2H2 ZF
326
348
FKCLTCGKDFKQKSTLLQHDRIH
FBpp0131714
C2H2 ZF
354
376
FPCSECGKRFRQQSHLTQHLRIH
FBpp0131714
C2H2 ZF
382
404
FTCPYCSRSFRQRAILNQHIRIH
FBpp0131714
C2H2 ZF
410
432
FACPECGKHFRQKAILNQHVRTH
FBpp0131714
C2H2 ZF
522
544
VRCPICDKEFKQKTTLLQHGCIH
FBpp0131714
C2H2 ZF
550
572
YPCPECGKRFRQQSHLTQHLRIH
FBpp0131714
C2H2 ZF
578
600
FGCMYCPRFFRQRTILNQHLRIH
FBpp0131714
C2H2 ZF
606
628
YKCGQCGKDFRQKAILDQHTRTH
FBpp0131714
C2H2 ZF
634
658
FCCPMPNCRRRFATENEVTKHIDNH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila erecta
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
jim
Drosophila melanogaster
FBgn0027339
D
0.827
GI11869
Drosophila mojavensis
FBgn0134627
I
0.827
GM22079
Drosophila sechellia
FBgn0176950
I
0.827
GJ13563
Drosophila virilis
FBgn0200787
I
0.827
GK20499
Drosophila willistoni
FBgn0222496
I
0.827
GE19490
Drosophila yakuba
FBgn0236831
I
0.827
GH14766
Drosophila grimshawi
FBgn0122242
I
0.826
GL25186
Drosophila persimilis
FBgn0162770
I
0.826
MDOA001493
Musca domestica
MDOA001493
I
0.825
GA10941
Drosophila pseudoobscura
FBgn0070997
I
0.822