CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH14766
(
Drosophila grimshawi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0122242
T115318_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
jim
M06123_2.00
Drosophila melanogaster
BKKNNKTTTTKTTKB
VMAAMAAAAMNNMMV
B1H
Zhu et al.(2011)
jim_F1-9_SOLEXA_2.5_FBgn0027339
0.826
0.995
jim
M06124_2.00
Drosophila melanogaster
TSKTTTTTTTT
AAAAAAAAMSA
B1H
Zhu et al.(2011)
jim_SANGER_2.5_FBgn0027339
0.826
0.995
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0148672
C2H2 ZF
337
359
FKCLTCGKDFKQKSTLLQHDRIH
FBpp0148672
C2H2 ZF
365
387
FPCSECGKRFRQQSHLTQHLRIH
FBpp0148672
C2H2 ZF
393
415
FTCPYCSRSFRQRAILNQHIRIH
FBpp0148672
C2H2 ZF
421
443
FACPECGKHFRQKAILNQHVRTH
FBpp0148672
C2H2 ZF
533
555
VRCPICDKEFKQKTTLLQHGCIH
FBpp0148672
C2H2 ZF
561
583
YPCPECGKRFRQQSHLTQHLRIH
FBpp0148672
C2H2 ZF
589
611
FGCMYCPRFFRQRTILNQHLRIH
FBpp0148672
C2H2 ZF
617
639
YKCTQCGKDFRQKAILDQHTRTH
FBpp0148672
C2H2 ZF
645
669
FCCPMPNCRRRFATENEVTKHIDNH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila grimshawi
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GL25186
Drosophila persimilis
FBgn0162770
I
0.827
jim
Drosophila melanogaster
FBgn0027339
D
0.826
GG13168
Drosophila erecta
FBgn0105440
I
0.826
GI11869
Drosophila mojavensis
FBgn0134627
I
0.826
GM22079
Drosophila sechellia
FBgn0176950
I
0.826
GJ13563
Drosophila virilis
FBgn0200787
I
0.826
GK20499
Drosophila willistoni
FBgn0222496
I
0.826
GE19490
Drosophila yakuba
FBgn0236831
I
0.826
MDOA001493
Musca domestica
MDOA001493
I
0.824
GA10941
Drosophila pseudoobscura
FBgn0070997
I
0.823