CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh_scip_prom.46568.7098
(
Phytophthora kernoviae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
fgenesh_scip_prom.46568.7098
T117417_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh_scip_prom.46568.7098
C2H2 ZF
30
54
FQCPVPSCNGRFQRKFTLREHMKTH
fgenesh_scip_prom.46568.7098
C2H2 ZF
60
84
YQCAIRSCAKRFSTSGNLARHRRLH
fgenesh_scip_prom.46568.7098
C2H2 ZF
89
113
LECPVEGCTRIFTKSEKLARHLQNH
fgenesh_scip_prom.46568.7098
C2H2 ZF
119
144
HICVVEGCGKTFSTAGNLTRHLRTQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora kernoviae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_10778
Phytophthora parasitica
F443_10778
N
0.827
fgenesh_scip_prom.28083.6794
Phytophthora lateralis
fgenesh_scip_prom.28083.6794
N
0.827
Phyra76298
Phytophthora ramorum
Phyra76298
N
0.827
Physo134729
Phytophthora sojae
Physo134729
N
0.827
PITG_10769
Phytophthora infestans
PITG_10769
N
0.827
HpaG807957
Hyaloperonospora arabidopsidis
HpaG807957
N
0.778