CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra76298
(
Phytophthora ramorum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Phyra76298
T126270_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra76298
C2H2 ZF
28
52
FQCPVPSCNGRFQRKFTLREHMKTH
Phyra76298
C2H2 ZF
58
82
YQCAIRSCAKRFSTSGNLARHRRLH
Phyra76298
C2H2 ZF
87
111
LECPVEGCTRIFTKSEKLARHLQNH
Phyra76298
C2H2 ZF
117
142
HICVVEGCGKTFSTAGNLTRHLRTQH
Links
Other
C2H2 ZF
family TFs
Other
Phytophthora ramorum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_10778
Phytophthora parasitica
F443_10778
N
0.827
fgenesh_scip_prom.28083.6794
Phytophthora lateralis
fgenesh_scip_prom.28083.6794
N
0.827
fgenesh_scip_prom.46568.7098
Phytophthora kernoviae
fgenesh_scip_prom.46568.7098
N
0.827
Physo134729
Phytophthora sojae
Physo134729
N
0.827
PITG_10769
Phytophthora infestans
PITG_10769
N
0.827
HpaG807957
Hyaloperonospora arabidopsidis
HpaG807957
N
0.778