CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA20G30061
(
Glycine max
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GLYMA20G30061
T118450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA20G30061.1
C2H2 ZF
87
110
QKCNKCSREFCSPINYRRHIRIQH
GLYMA20G30061.2
C2H2 ZF
73
96
QKCNKCSREFCSPINYRRHIRIQH
GLYMA20G30061.3
C2H2 ZF
73
96
QKCNKCSREFCSPINYRRHIRIQH
Links
Other
C2H2 ZF
family TFs
Other
Glycine max
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_021319.1
Lotus japonicus
LjSGA_021319.1
N
0.817
GLYMA10G37780
Glycine max
GLYMA10G37780
N
0.808
PGSC0003DMG400015791
Solanum tuberosum
PGSC0003DMG400015791
N
0.798
Solyc03g025440.2
Solanum lycopersicum
Solyc03g025440.2
N
0.798
TCM_015200
Theobroma cacao
TCM_015200
N
0.798
Aquca_013_00290
Aquilegia coerulea
Aquca_013_00290
N
0.798
evm.TU.supercontig_107.76
Carica papaya
evm.TU.supercontig_107.76
N
0.798
Gorai.004G117900
Gossypium raimondii
Gorai.004G117900
N
0.798
Gorai.008G275600
Gossypium raimondii
Gorai.008G275600
N
0.798
PK09701.1
Cannabis sativa
PK09701.1
N
0.798
VIT_16s0050g00700
Vitis vinifera
VIT_16s0050g00700
N
0.796