Gorai.004G117900 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.004G117900 T143009_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G117900.1 C2H2 ZF 95 118
Gorai.004G117900.2 C2H2 ZF 62 85
Gorai.004G117900.3 C2H2 ZF 62 85
Gorai.004G117900.4 C2H2 ZF 62 85
Gorai.004G117900.5 C2H2 ZF 62 85
Gorai.004G117900.6 C2H2 ZF 62 85

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_015200 Theobroma cacao TCM_015200 N 0.827
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N 0.827
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N 0.827
PK09701.1 Cannabis sativa PK09701.1 N 0.827
GLYMA10G37780 Glycine max GLYMA10G37780 N 0.817
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N 0.817
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N 0.815
GLYMA20G30061 Glycine max GLYMA20G30061 N 0.798
PGSC0003DMG400015791 Solanum tuberosum PGSC0003DMG400015791 N 0.798
Solyc03g025440.2 Solanum lycopersicum Solyc03g025440.2 N 0.798
LjSGA_021319.1 Lotus japonicus LjSGA_021319.1 N 0.798
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N 0.768
Pm019310 Prunus mume Pm019310 N 0.768
30169.m006244 Ricinus communis 30169.m006244 N 0.768
gene13234-v1.0-hybrid Fragaria vesca gene13234-v1.0-hybrid N 0.768
MDP0000291317 Malus domestica MDP0000291317 N 0.768
AC234522.1_FG009 Zea mays AC234522.1_FG009 N 0.758
BGIOSGA031305 Oryza indica BGIOSGA031305 N 0.758
GRMZM2G142502 Zea mays GRMZM2G142502 N 0.758
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N 0.758
OBART09G20240 Oryza barthii OBART09G20240 N 0.758
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N 0.758
OLONG_005584 Oryza longistaminata OLONG_005584 N 0.758
OMERI01G25790 Oryza meridionalis OMERI01G25790 N 0.758
ONIVA03G00390 Oryza nivara ONIVA03G00390 N 0.758
OPUNC09G18580 Oryza punctata OPUNC09G18580 N 0.758
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N 0.758
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N 0.758
OS09G0570200 Oryza sativa OS09G0570200 N 0.758
cassava18962.valid.m1 Manihot esculenta cassava18962.valid.m1 N 0.758
mgf002951m Mimulus guttatus mgf002951m N 0.758