CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-pve_contig_417-snap-gene-0.20
(
Pythium vexans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
maker-pve_contig_417-snap-gene-0.20
T122613_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPV00000019577
C2H2 ZF
77
96
HACDVADCGKSFDSKWALIR
EPrPV00000019577
C2H2 ZF
132
156
FPCTFPNCDKSFAEKSAMTRHLQTH
EPrPV00000019577
C2H2 ZF
162
186
FKCTYAGCTKSFKGKDYLEFHLKIH
EPrPV00000019577
C2H2 ZF
192
217
YACEHPTCSKTFCSPKSLKKHIRLWH
Links
Other
C2H2 ZF
family TFs
Other
Pythium vexans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PYU1_G004510
Pythium ultimum
PYU1_G004510
N
0.802
snap_masked-pir_contig_42-abinit-gene-0.59
Pythium irregulare
snap_masked-pir_contig_42-abinit-gene-0.59
N
0.799
F443_19094
Phytophthora parasitica
F443_19094
N
0.797
fgenesh_scip_prom.28083.11122
Phytophthora lateralis
fgenesh_scip_prom.28083.11122
N
0.794
Phyra77610
Phytophthora ramorum
Phyra77610
N
0.794
PITG_02480
Phytophthora infestans
PITG_02480
N
0.794
Physo128284
Phytophthora sojae
Physo128284
N
0.791
maker-piw_contig_198-snap-gene-0.25
Pythium iwayamai
maker-piw_contig_198-snap-gene-0.25
N
0.773