tra-1 (Caenorhabditis elegans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 WBGene00006604 T131576_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
tra-1
M10386_2.00		 Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_01		 (Direct) (Direct)
tra-1
M10387_2.00		 Caenorhabditis elegans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
N$TRA1_02		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Y47D3A.6a C2H2 ZF 243 269
Y47D3A.6a C2H2 ZF 276 299
Y47D3A.6a C2H2 ZF 305 330
Y47D3A.6a C2H2 ZF 336 361
Y47D3A.6b C2H2 ZF 207 232
Y47D3A.6b C2H2 ZF 243 269

Links

Other C2H2 ZF family TFs
Other Caenorhabditis elegans TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG13188 Caenorhabditis briggsae CBG13188 I 0.824
CRE04883 Caenorhabditis remanei CRE04883 I 0.812
CBN25087 Caenorhabditis brenneri CBN25087 I 0.812
CJA00622 Caenorhabditis japonica CJA00622 I 0.809