Pvit_14046 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_14046 T137385_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZIC5
M04471_2.00 		Homo sapiens
NKACCCCCCGCTGHGH
DCDCAGCGGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_HT-SELEX 		0.810 0.964
ZIC5
M04472_2.00 		Homo sapiens
NKACCCCCYGCTGTGM
KCACAGCRGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC5_eDBD_Methyl-HT-SELEX 		0.810 0.964
Zic5
M00780_2.00 		Mus musculus
BRCCCCCYDS
SHRGGGGGYV		 PBM
Weirauch et al.(2013)
pTH2818 		0.800 0.955
Zic3
M00151_2.00 		Mus musculus
NCMYVBNRNB
VNYNVBRKGN		 PBM
Badis et al.(2009)
Zic3_3119 		0.760 0.873
ZIC3
M02894_2.00 		Homo sapiens
BACCCCCYGCKGYGH
DCRCMGCRGGGGGTV		 SELEX
Jolma et al.(2013)
ZIC3_1 		0.760 0.873
Zic3
M02936_2.00 		Mus musculus
KRCCCCCYGCTGYGH
DCRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
Zic3_1 		0.760 0.873
ZIC3
M04491_2.00 		Homo sapiens
VGACCCCCYGCTGTGM
KCACAGCRGGGGGTCB		 SELEX
Yin et al.(2017)
ZIC3_eDBD_HT-SELEX 		0.760 0.873
ZIC3
M04493_2.00 		Homo sapiens
BACCCCCYGCTGYGH
DCRCAGCRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC3_FL_HT-SELEX 		0.760 0.873
ZIC3
M08902_2.00 		Homo sapiens
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_HUMAN.H11MO.0.B 		0.760 0.873
Zic3
M09013_2.00 		Mus musculus
NVVYHCCTGCTGDGN
NCHCAGCAGGDRBBN		 Misc
Kulakovskiy et al.(2013)
ZIC3_MOUSE.H11MO.0.A 		0.760 0.873
ZIC3
M10229_2.00 		Homo sapiens
VRBCMCCCN
NGGGKGVYB		 Transfac
Matys et al.(2006)
V$ZIC3_01 		0.760 0.873
Zic3
M10359_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC3_07 		0.760 0.873
ZIC3
M04492_2.00 		Homo sapiens
NKACCCCCTGCTGTGM
KCACAGCAGGGGGTMN		 SELEX
Yin et al.(2017)
ZIC3_eDBD_Methyl-HT-SELEX 		0.760 0.873
ZIC3
M04494_2.00 		Homo sapiens
BRCCCCCTGCTGTGM
KCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC3_FL_Methyl-HT-SELEX 		0.760 0.873
Zic1
M00137_2.00 		Mus musculus
NCMYVBNGNK
MNCNVBRKGN		 PBM
Badis et al.(2009)
Zic1_0991 		0.756 0.909
ZIC1
M02893_2.00 		Homo sapiens
KRCCCCCYGCTGYG
CRCAGCRGGGGGYM		 SELEX
Jolma et al.(2013)
ZIC1_1 		0.756 0.909
ZIC1
M04485_2.00 		Homo sapiens
BVCCMCCYGYHGYGH
DCRCDRCRGGKGGBV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_HT-SELEX 		0.756 0.909
ZIC1
M04487_2.00 		Homo sapiens
BVCCCCCYGCTGYGH
DCRCAGCRGGGGGBV		 SELEX
Yin et al.(2017)
ZIC1_FL_HT-SELEX 		0.756 0.909
ZIC1
M08900_2.00 		Homo sapiens
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_HUMAN.H11MO.0.B 		0.756 0.909
Zic1
M08990_2.00 		Mus musculus
BMSCHCCCM
KGGGDGSKV		 Misc
Kulakovskiy et al.(2013)
ZIC1_MOUSE.H11MO.0.B 		0.756 0.909
ZIC1
M10226_2.00 		Homo sapiens
KRCNMMCYV
BRGKKNGTM		 Transfac
Matys et al.(2006)
V$ZIC1_01 		0.756 0.909
ZIC1
M10227_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ZIC1_Q2 		0.756 0.909
ZIC1
M04486_2.00 		Homo sapiens
BACCCCCYRCTGTGM
KCACAGYRGGGGGTV		 SELEX
Yin et al.(2017)
ZIC1_eDBD_Methyl-HT-SELEX 		0.756 0.909
ZIC1
M04488_2.00 		Homo sapiens
BRCCCCCTGCTGTGH
DCACAGCAGGGGGYV		 SELEX
Yin et al.(2017)
ZIC1_FL_Methyl-HT-SELEX 		0.756 0.909
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14046 C2H2 ZF 59 77
Pvit_14046 C2H2 ZF 86 113
Pvit_14046 C2H2 ZF 119 143
Pvit_14046 C2H2 ZF 149 173
Pvit_14046 C2H2 ZF 179 203

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
zic5 Danio rerio ENSDARG00000016022 I 0.818
ENSONIG00000006787 Oreochromis niloticus ENSONIG00000006787 I 0.814
zic5 Oryzias latipes ENSORLG00000011124 I 0.814
ENSPFOG00000012158 Poecilia formosa ENSPFOG00000012158 I 0.814
ENSXMAG00000010996 Xiphophorus maculatus ENSXMAG00000010996 I 0.814
ENSAMEG00000004500 Ailuropoda melanoleuca ENSAMEG00000004500 I 0.810
ZIC5 Canis familiaris ENSCAFG00000005834 I 0.810
ENSCJAG00000020987 Callithrix jacchus ENSCJAG00000020987 I 0.810
ENSCSAG00000017495 Chlorocebus sabaeus ENSCSAG00000017495 I 0.810
ZIC5 Dasypus novemcinctus ENSDNOG00000046390 I 0.810
ZIC5 Homo sapiens ENSG00000139800 D 0.810
ZIC5 Gorilla gorilla ENSGGOG00000022385 I 0.810
ZIC5 Macaca mulatta ENSMMUG00000014821 I 0.810
ENSNLEG00000007807 Nomascus leucogenys ENSNLEG00000007807 I 0.810
ENSOARG00000004385 Ovis aries ENSOARG00000004385 I 0.810
ENSPANG00000018055 Papio anubis ENSPANG00000018055 I 0.810
ZIC5 Procavia capensis ENSPCAG00000011845 I 0.810
ENSPSIG00000009089 Pelodiscus sinensis ENSPSIG00000009089 I 0.810
ENSPTRG00000034285 Pan troglodytes ENSPTRG00000034285 I 0.810
Zic5 Rattus norvegicus ENSRNOG00000014358 I 0.810
ENSSTOG00000027399 Ictidomys tridecemlineatus ENSSTOG00000027399 I 0.810
ZIC5 Erinaceus europaeus ENSEEUG00000002965 I 0.809
ENSAMXG00000002323 Astyanax mexicanus ENSAMXG00000002323 I 0.808
ENSLOCG00000003087 Lepisosteus oculatus ENSLOCG00000003087 I 0.808
ENSMEUG00000004592 Macropus eugenii ENSMEUG00000004592 I 0.808
ZIC5 Monodelphis domestica ENSMODG00000007733 I 0.808
zic5 Tetraodon nigroviridis ENSTNIG00000014980 I 0.804
zic5 Takifugu rubripes ENSTRUG00000011797 I 0.804
zic5 Xenopus tropicalis XB-GENE-480775 I 0.804
zic5.S Xenopus laevis XB-GENE-865408 I 0.791
CGI_10016116 Crassostrea gigas CGI_10016116 I 0.783
ENSAMXG00000010941 Astyanax mexicanus ENSAMXG00000010941 I 0.774
ENSECAG00000013406 Equus caballus ENSECAG00000013406 I 0.773
zic4 Danio rerio ENSDARG00000031307 I 0.764
zic4 Gasterosteus aculeatus ENSGACG00000003685 I 0.764
ENSGMOG00000001798 Gadus morhua ENSGMOG00000001798 I 0.764
ENSONIG00000005878 Oreochromis niloticus ENSONIG00000005878 I 0.764
zic4 Oryzias latipes ENSORLG00000010055 I 0.764
ENSPFOG00000014007 Poecilia formosa ENSPFOG00000014007 I 0.764
zic4 Tetraodon nigroviridis ENSTNIG00000012759 I 0.764
zic4 Takifugu rubripes ENSTRUG00000017765 I 0.764
ENSXMAG00000009162 Xiphophorus maculatus ENSXMAG00000009162 I 0.764
CapteG160442 Capitella teleta CapteG160442 I 0.763
ENSONIG00000005875 Oreochromis niloticus ENSONIG00000005875 I 0.763
ENSPFOG00000013981 Poecilia formosa ENSPFOG00000013981 I 0.763
ENSTGUG00000008837 Taeniopygia guttata ENSTGUG00000008837 I 0.763
ENSLOCG00000007717 Lepisosteus oculatus ENSLOCG00000007717 I 0.762
zic1.S Xenopus laevis XB-GENE-864815 I 0.762
zic1 Oryzias latipes ENSORLG00000010050 I 0.761
ENSAMEG00000002684 Ailuropoda melanoleuca ENSAMEG00000002684 I 0.760
ZIC3 Bos taurus ENSBTAG00000021413 I 0.760
ZIC3 Canis familiaris ENSCAFG00000018979 I 0.760
ZIC3 Callithrix jacchus ENSCJAG00000013792 I 0.760
ENSCPOG00000002374 Cavia porcellus ENSCPOG00000002374 I 0.760
ENSCSAG00000007453 Chlorocebus sabaeus ENSCSAG00000007453 I 0.760
ZIC3 Dasypus novemcinctus ENSDNOG00000006192 I 0.760
ENSDORG00000014318 Dipodomys ordii ENSDORG00000014318 I 0.760
ZIC3 Equus caballus ENSECAG00000013318 I 0.760
ZIC3 Echinops telfairi ENSETEG00000018846 I 0.760
ZIC3 Felis catus ENSFCAG00000025684 I 0.760
ZIC3 Homo sapiens ENSG00000156925 D 0.760
ZIC3 Gorilla gorilla ENSGGOG00000011914 I 0.760
ZIC3 Loxodonta africana ENSLAFG00000007048 I 0.760
ENSMICG00000010339 Microcebus murinus ENSMICG00000010339 I 0.760
ZIC3 Myotis lucifugus ENSMLUG00000011691 I 0.760
ENSMPUG00000001786 Mustela putorius furo ENSMPUG00000001786 I 0.760
Zic3 Mus musculus ENSMUSG00000067860 D 0.760
ENSNLEG00000003005 Nomascus leucogenys ENSNLEG00000003005 I 0.760
ENSOARG00000010774 Ovis aries ENSOARG00000010774 I 0.760
ZIC3 Oryctolagus cuniculus ENSOCUG00000009358 I 0.760
ZIC3 Otolemur garnettii ENSOGAG00000011700 I 0.760
ENSPANG00000011357 Papio anubis ENSPANG00000011357 I 0.760
ENSPPYG00000020775 Pongo abelii ENSPPYG00000020775 I 0.760
ZIC3 Pteropus vampyrus ENSPVAG00000011652 I 0.760
Zic3 Rattus norvegicus ENSRNOG00000000861 I 0.760
ZIC3 Sus scrofa ENSSSCG00000012705 I 0.760
ENSSTOG00000024153 Ictidomys tridecemlineatus ENSSTOG00000024153 I 0.760
ENSTSYG00000003356 Tarsius syrichta ENSTSYG00000003356 I 0.760
SMAR005380 Strigamia maritima SMAR005380 I 0.760
ENSP00000287538-D1 Bos grunniens ENSP00000287538-D1 I 0.760
ENSP00000287538 Macaca fascicularis ENSP00000287538 I 0.760
Myotis_brandtii_ZIC3_10005513 Myotis brandtii Myotis_brandtii_ZIC3_10005513 I 0.760
estExt_gwp.C_400285 Branchiostoma floridae estExt_gwp.C_400285 I 0.760
ENSFALG00000007091 Ficedula albicollis ENSFALG00000007091 I 0.759
ENSMEUG00000009632 Macropus eugenii ENSMEUG00000009632 I 0.759
ZIC4 Otolemur garnettii ENSOGAG00000007463 I 0.759
ENSSHAG00000015091 Sarcophilus harrisii ENSSHAG00000015091 I 0.759
SPU_028583 Strongylocentrotus purpuratus SPU_028583 I 0.759
SPU_030070 Strongylocentrotus purpuratus SPU_030070 I 0.759
Alligator_sinensis_CCG012205.1 Alligator sinensis Alligator_sinensis_CCG012205.1 I 0.759
Ogr15027 Ophisaurus gracilis Ogr15027 I 0.759
Pvit_01478 Pogona vitticeps Pvit_01478 I 0.759
zic4 Xenopus tropicalis XB-GENE-1033015 I 0.759
zic4.L Xenopus laevis XB-GENE-1033019 I 0.759
zic2b Tetraodon nigroviridis ENSTNIG00000014979 I 0.758
ENSGMOG00000019585 Gadus morhua ENSGMOG00000019585 I 0.757
ENSMODG00000021250 Monodelphis domestica ENSMODG00000021250 I 0.757
ENSPSIG00000004881 Pelodiscus sinensis ENSPSIG00000004881 I 0.757
ZIC1 Anolis carolinensis ENSACAG00000006947 I 0.756
ENSAMEG00000002149 Ailuropoda melanoleuca ENSAMEG00000002149 I 0.756
ENSAMXG00000010931 Astyanax mexicanus ENSAMXG00000010931 I 0.756
ENSAPLG00000002960 Anas platyrhynchos ENSAPLG00000002960 I 0.756
ZIC1 Bos taurus ENSBTAG00000014751 I 0.756
ZIC1 Callithrix jacchus ENSCJAG00000001524 I 0.756
ENSCSAG00000011409 Chlorocebus sabaeus ENSCSAG00000011409 I 0.756
zic1 Danio rerio ENSDARG00000015567 I 0.756
ZIC1 Dasypus novemcinctus ENSDNOG00000047101 I 0.756
ENSFALG00000007094 Ficedula albicollis ENSFALG00000007094 I 0.756
ZIC1 Felis catus ENSFCAG00000007061 I 0.756
ZIC1 Homo sapiens ENSG00000152977 D 0.756
zic1 Gasterosteus aculeatus ENSGACG00000003678 I 0.756
ENSGALG00000006811 Gallus gallus ENSGALG00000006811 I 0.756
ZIC1 Gorilla gorilla ENSGGOG00000001101 I 0.756
ENSGMOG00000001788 Gadus morhua ENSGMOG00000001788 I 0.756
ZIC1 Loxodonta africana ENSLAFG00000030632 I 0.756
ENSLOCG00000007706 Lepisosteus oculatus ENSLOCG00000007706 I 0.756
ZIC1 Microcebus murinus ENSMICG00000014401 I 0.756
ZIC1 Macaca mulatta ENSMMUG00000004742 I 0.756
ENSMPUG00000011764 Mustela putorius furo ENSMPUG00000011764 I 0.756
Zic1 Mus musculus ENSMUSG00000032368 D 0.756
ENSNLEG00000002407 Nomascus leucogenys ENSNLEG00000002407 I 0.756
ENSOARG00000005434 Ovis aries ENSOARG00000005434 I 0.756
ZIC1 Otolemur garnettii ENSOGAG00000007465 I 0.756
ENSPANG00000005804 Papio anubis ENSPANG00000005804 I 0.756
ENSPSIG00000005002 Pelodiscus sinensis ENSPSIG00000005002 I 0.756
ZIC1 Pan troglodytes ENSPTRG00000015501 I 0.756
Zic1 Rattus norvegicus ENSRNOG00000014644 I 0.756
ZIC1 Sus scrofa ENSSSCG00000011692 I 0.756
ENSSTOG00000000952 Ictidomys tridecemlineatus ENSSTOG00000000952 I 0.756
ZIC1 Taeniopygia guttata ENSTGUG00000008838 I 0.756
zic1 Takifugu rubripes ENSTRUG00000017760 I 0.756
ZIC1 Tursiops truncatus ENSTTRG00000014350 I 0.756
LotgiG193238 Lottia gigantea LotgiG193238 I 0.756
Aan_R013349 Calypte anna Aan_R013349 I 0.756
Alligator_sinensis_CCG012204.1 Alligator sinensis Alligator_sinensis_CCG012204.1 I 0.756
Cmyd_10020767 Chelonia mydas Cmyd_10020767 I 0.756
ENSP00000282928-D1 Bos grunniens ENSP00000282928-D1 I 0.756
ENSP00000282928 Macaca fascicularis ENSP00000282928 I 0.756
Gfo_R005436 Geospiza fortis Gfo_R005436 I 0.756
Myotis_brandtii_ZIC1_10009541 Myotis brandtii Myotis_brandtii_ZIC1_10009541 I 0.756
Ogr15030 Ophisaurus gracilis Ogr15030 I 0.756
Pvit_01479 Pogona vitticeps Pvit_01479 I 0.756
XP_002937379 Xenopus tropicalis XP_002937379 I 0.756