CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10011009.g
(
Linum usitatissimum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Lus10011009.g
T143108_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10011009
C2H2 ZF
77
101
FLCSFDSCGKTFIDAGALRKHSHIH
Lus10011009
C2H2 ZF
106
130
YVCHFEGCGKKFIDSSKLKRHNLIH
Lus10011009
C2H2 ZF
136
160
FVCPHEDCGKAFSLDFNLRSHMKTH
Lus10011009
C2H2 ZF
166
191
HICPFAECGKRYAHDYKLRNHIQSQH
Links
Other
C2H2 ZF
family TFs
Other
Linum usitatissimum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400009082
Solanum tuberosum
PGSC0003DMG400009082
N
0.791
Solyc03g083310.2
Solanum lycopersicum
Solyc03g083310.2
N
0.791
gene11016-v1.0-hybrid
Fragaria vesca
gene11016-v1.0-hybrid
N
0.788