Pavir.Ia04226 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.Ia04226 T143384_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia04226.1.p C2H2 ZF 534 557
Pavir.Ia04226.1.p C2H2 ZF 558 581
Pavir.Ia04226.1.p C2H2 ZF 587 611
Pavir.Ia04226.1.p C2H2 ZF 617 640
Pavir.Ia04226.2.p C2H2 ZF 534 557
Pavir.Ia04226.2.p C2H2 ZF 558 581
Pavir.Ia04226.2.p C2H2 ZF 587 611
Pavir.Ia04226.2.p C2H2 ZF 617 640

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J38242 Panicum virgatum Pavir.J38242 N 0.762
Si034911m.g Setaria italica Si034911m.g N 0.759