Pavir.J38242 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J38242 T143434_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J38242.1.p C2H2 ZF 496 519
Pavir.J38242.1.p C2H2 ZF 520 543
Pavir.J38242.1.p C2H2 ZF 549 573
Pavir.J38242.1.p C2H2 ZF 579 602

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb01g047010 Sorghum bicolor Sb01g047010 N 0.812
GRMZM2G329159 Zea mays GRMZM2G329159 N 0.798
Pavir.Ia04226 Panicum virgatum Pavir.Ia04226 N 0.762