CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sjc_0072480
(
Schistosoma japonicum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sjc_0072480
T145040_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000006816
C2H2 ZF
265
289
HPCTYRGCGKVFFSRTSLIYHKQSH
CPRT0000006816
C2H2 ZF
295
319
YMCTYPSCGITFCNEALLKTHIQLH
CPRT0000006816
C2H2 ZF
328
352
FSCTLPGCNKVFVTRECLIEHIRIH
CPRT0000006816
C2H2 ZF
358
382
FICDYPGCTHRFARRCNLFAHKRVH
CPRT0000006816
C2H2 ZF
391
415
YHCIHAGCGKTFLYSRSLTEHMNVH
CPRT0000006816
C2H2 ZF
421
445
YVCDYPGCEKSFTSKSYLYAHRRIH
Links
Other
C2H2 ZF
family TFs
Other
Schistosoma japonicum
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_00150
Schistosoma haematobium
A_00150
N
0.817
SCUD_0001644601
Schistosoma curassoni
SCUD_0001644601
N
0.817
SMRZ_0002540101
Schistosoma margrebowiei
SMRZ_0002540101
N
0.817
SMTD_0000892601
Schistosoma mattheei
SMTD_0000892601
N
0.817
Smp_046360
Schistosoma mansoni
Smp_046360
N
0.770
SROB_0001223201
Schistosoma rodhaini
SROB_0001223201
N
0.765