CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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patz1
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-976137
T145676_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002931942
C2H2 ZF
251
273
LPCGLCDKVFTDPLRLRHHEAQH
XP_002931942
C2H2 ZF
313
335
VSCDLCGKIFRDVYHLNRHKLSH
XP_002931942
C2H2 ZF
341
363
YSCPVCGLRFKRKDRMSYHVRSH
XP_002931942
C2H2 ZF
371
394
YICQSCGKGFSRPDHLNGHIKQVH
XP_002931943
C2H2 ZF
251
273
LPCGLCDKVFTDPLRLRHHEAQH
XP_002931943
C2H2 ZF
313
335
VSCDLCGKIFRDVYHLNRHKLSH
XP_002931943
C2H2 ZF
341
363
YSCPVCGLRFKRKDRMSYHVRSH
XP_002931943
C2H2 ZF
371
394
YICQSCGKGFSRPDHLNGHIKQVH
XP_002931943
C2H2 ZF
400
422
HKCETCNASFATRDRLRSHLACH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
patz1.S
Xenopus laevis
XB-GENE-976140
N
0.792