CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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patz1.S
(
Xenopus laevis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-976140
T145677_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAH92304
C2H2 ZF
160
182
LPCGLCDKVFTDPLRLRQHEAQH
AAH92304
C2H2 ZF
222
244
VSCDLCGKIFRDVYHLNRHKLSH
AAH92304
C2H2 ZF
250
272
YSCPVCGLRFKRKDRMSYHVRSH
AAH92304
C2H2 ZF
280
303
YICQSCGKGFSRPDHLNGHIKQVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus laevis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
patz1
Xenopus tropicalis
XB-GENE-976137
N
0.792