CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
e_gw1.7.469.1
(
Tremella mesenterica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw1.7.469.1
T146136_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pp-1
M01870_2.00
Neurospora crassa
NVCCCCTKDN
NHMAGGGGBN
PBM
Weirauch et al.(2014)
pTH8626
0.786
0.804
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.7.469.1
C2H2 ZF
17
41
FSCPLLSCGRLFKRLEHLKRHVRTH
e_gw1.7.469.1
C2H2 ZF
47
69
YVCPKCDKRFSRSDNLHQHNKTH
Links
Other
C2H2 ZF
family TFs
Other
Tremella mesenterica
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pp-1
Neurospora crassa
NCU00340
D
0.786
gw1.66.31.1
Phycomyces blakesleeanus
gw1.66.31.1
I
0.777
L804_04848
Cryptococcus gattii
L804_04848
I
0.766
H102_04265
Trichophyton rubrum
H102_04265
I
0.758
H105_04290
Trichophyton soudanense
H105_04290
I
0.758