CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc03487
(
Meloidogyne incognita
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Minc03487
T146399_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc03487
C2H2 ZF
118
141
FTCPQCDKKFKTGRYLRKHFNQIH
Minc03487
C2H2 ZF
155
179
YLCNWPLCDKSFISASKLEGHLNSH
Minc03487
C2H2 ZF
185
208
YGCEHCGKNFSVKYELNRHLQKYH
Links
Other
C2H2 ZF
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf03648-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf03648-augustus-gene-0.6
N
0.827
MhA1_Contig684.frz3.gene34
Meloidogyne hapla
MhA1_Contig684.frz3.gene34
N
0.787