CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g11982
(
Steinernema monticolum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
L898_g11982
T154724_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g11982.t1
C2H2 ZF
112
134
HICEDCGKGFPYLSILESHKRCH
L898_g11982.t1
C2H2 ZF
140
162
FPCHFCSKKFAQKATLQVHERTH
L898_g11982.t1
C2H2 ZF
168
191
YKCKYCEKTFAQYGTKTVHEKSAH
L898_g11982.t1
C2H2 ZF
197
219
YKCPKCSKCLSSPSALYTHKKTH
L898_g11982.t1
C2H2 ZF
224
247
FHCEFCTKTFTLKNYLKLHVKQVH
L898_g11982.t1
C2H2 ZF
254
276
HVCKYCNKSFAYAGSLQVHVRTH
L898_g11982.t1
C2H2 ZF
282
304
YTCKYCPKAFASQGNLQSHERTH
L898_g11982.t1
C2H2 ZF
310
332
YSCNVCGRAFIQKSQLTAHEATH
L898_g11982.t1
C2H2 ZF
351
373
FVCKFCGKRYAYASSLYVHTRLH
L898_g11982.t1
C2H2 ZF
379
401
FRCAYCDKSFTNQGNMQVHERVH
L898_g11982.t1
C2H2 ZF
407
428
FKCNTCDRRYAQKVGLKIHMEQ
Links
Other
C2H2 ZF
family TFs
Other
Steinernema monticolum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g23172
Steinernema feltiae
L889_g23172
N
0.826
L893_g2100
Steinernema glaseri
L893_g2100
N
0.824
L892_g27548
Steinernema scapterisci
L892_g27548
N
0.824
L596_g25323
Steinernema carpocapsae
L596_g25323
N
0.824
ASU_02874
Ascaris suum
ASU_02874
N
0.797
WBGene00242154
Onchocerca volvulus
WBGene00242154
N
0.793
nOo.2.0.1.g02893
Onchocerca ochengi
nOo.2.0.1.g02893
N
0.793
SPAL_0001279900
Strongyloides papillosus
SPAL_0001279900
N
0.792
SVE_1922800
Strongyloides venezuelensis
SVE_1922800
N
0.792
nDi.2.2.2.g05206
Dirofilaria immitis
nDi.2.2.2.g05206
N
0.789
SSTP_0001241100
Strongyloides stercoralis
SSTP_0001241100
N
0.789
RSKR_0000771600
Rhabditophanes kr3021
RSKR_0000771600
N
0.789
WUBG_03748
Wuchereria bancrofti
WUBG_03748
N
0.789
EEL_0000837001
Elaeophora elaphi
EEL_0000837001
N
0.789
HCOI00939900
Haemonchus contortus
HCOI00939900
N
0.788
Bm10919
Brugia malayi
Bm10919
N
0.788
DICVIV_07953
Dictyocaulus viviparus
DICVIV_07953
N
0.785
LOAG_03372
Loa loa
LOAG_03372
N
0.783
PTRK_0000168600
Parastrongyloides trichosuri
PTRK_0000168600
N
0.782
GPLIN_000003100
Globodera pallida
GPLIN_000003100
N
0.776
NBR_0001172801
Nippostrongylus brasiliensis
NBR_0001172801
N
0.767