CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0001172801
(
Nippostrongylus brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
NBR_0001172801
T155093_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001172801-mRNA-1
C2H2 ZF
124
146
HICEICGKGFPYHSILESHKRCH
NBR_0001172801-mRNA-1
C2H2 ZF
152
174
FNCHFCDKKFAQKATLQVHERTH
NBR_0001172801-mRNA-1
C2H2 ZF
180
203
YKCRYCEKTFAQYGTKTVHEKSAH
NBR_0001172801-mRNA-1
C2H2 ZF
209
231
YKCPKCDKCLSSPSALYTHKKTH
NBR_0001172801-mRNA-1
C2H2 ZF
236
259
FQCEFCPKTFTLKNYLKLHVKQVH
NBR_0001172801-mRNA-1
C2H2 ZF
266
288
HVCRFCGKSFAYAGSLQVHVRTH
NBR_0001172801-mRNA-1
C2H2 ZF
294
316
YRCSYCPKAFASQGNLQSHERTH
NBR_0001172801-mRNA-1
C2H2 ZF
322
344
YSCTTCGRSFIQKSQLIAHEATH
NBR_0001172801-mRNA-1
C2H2 ZF
385
400
YVCKFCGKRYAYASSL
NBR_0001172801-mRNA-1
C2H2 ZF
401
421
CQYCDKCFTNQGNMQVHQRVH
NBR_0001172801-mRNA-1
C2H2 ZF
427
448
YSCNACGKSYAQKVGLKIHLEQ
Links
Other
C2H2 ZF
family TFs
Other
Nippostrongylus brasiliensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00939900
Haemonchus contortus
HCOI00939900
N
0.802
DICVIV_07953
Dictyocaulus viviparus
DICVIV_07953
N
0.788
SPAL_0001279900
Strongyloides papillosus
SPAL_0001279900
N
0.769
SVE_1922800
Strongyloides venezuelensis
SVE_1922800
N
0.769
L889_g23172
Steinernema feltiae
L889_g23172
N
0.767
L893_g2100
Steinernema glaseri
L893_g2100
N
0.767
L898_g11982
Steinernema monticolum
L898_g11982
N
0.767
L596_g25323
Steinernema carpocapsae
L596_g25323
N
0.765
L892_g27548
Steinernema scapterisci
L892_g27548
N
0.765
ASU_02874
Ascaris suum
ASU_02874
N
0.763
RSKR_0000771600
Rhabditophanes kr3021
RSKR_0000771600
N
0.763
SSTP_0001241100
Strongyloides stercoralis
SSTP_0001241100
N
0.758
WBGene00242154
Onchocerca volvulus
WBGene00242154
N
0.757
nOo.2.0.1.g02893
Onchocerca ochengi
nOo.2.0.1.g02893
N
0.757