maker-nMf.1.1.scaf04301-augustus-gene-0.7 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 maker-nMf.1.1.scaf04301-augustus-gene-0.7 T154850_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf04301-augustus-gene-0.7-mRNA-1 C2H2 ZF 190 210
maker-nMf.1.1.scaf04301-augustus-gene-0.7-mRNA-1 C2H2 ZF 218 240
maker-nMf.1.1.scaf04301-augustus-gene-0.7-mRNA-1 C2H2 ZF 246 268
maker-nMf.1.1.scaf04301-augustus-gene-0.7-mRNA-1 C2H2 ZF 274 296

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc18911 Meloidogyne incognita Minc18911 N 0.827
genemark-nMf.1.1.scaf15253-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf15253-processed-gene-0.1 N 0.810
MhA1_Contig627.frz3.gene1 Meloidogyne hapla MhA1_Contig627.frz3.gene1 N 0.769