CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g09016
(
Acanthocheilonema viteae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nAv.1.0.1.g09016
T155051_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t09016-RA
C2H2 ZF
77
100
YLCDICDSAFTLKHNIQTHLLLYH
nAv.1.0.1.t09016-RA
C2H2 ZF
115
138
YRCLKCNALFRTFAAVQKHRKRQH
nAv.1.0.1.t09016-RA
C2H2 ZF
145
167
KCETCQKEFPTASLLREHVAVIH
nAv.1.0.1.t09016-RA
C2H2 ZF
173
196
FKCTKCSAVFGRQGCLRRHDMMRH
nAv.1.0.1.t09016-RA
C2H2 ZF
233
255
YKCEQCEKRFVRRNDLRVHSDIH
nAv.1.0.1.t09016-RA
C2H2 ZF
261
284
YICPTCKQMFQRRIHFQKHARKCH
Links
Other
C2H2 ZF
family TFs
Other
Acanthocheilonema viteae
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nLs.2.1.2.g00825
Litomosoides sigmodontis
nLs.2.1.2.g00825
N
0.827
LOAG_06793
Loa loa
LOAG_06793
N
0.802
nDi.2.2.2.g05139
Dirofilaria immitis
nDi.2.2.2.g05139
N
0.785
WBGene00248244
Onchocerca volvulus
WBGene00248244
N
0.782