CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g00825
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g00825
T155314_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t00825-RA
C2H2 ZF
725
748
YLCDICDSAFTLKHNIQTHLLLYH
nLs.2.1.2.t00825-RA
C2H2 ZF
763
786
YRCLKCNMLFRTFAAVQKHRKRQH
nLs.2.1.2.t00825-RA
C2H2 ZF
793
815
KCETCQKEFPTASLLREHVAVIH
nLs.2.1.2.t00825-RA
C2H2 ZF
821
844
FKCTKCSAMFGRQGCLRRHDMMRH
nLs.2.1.2.t00825-RA
C2H2 ZF
881
903
YKCEQCEKCFVRRNDLRVHSDIH
nLs.2.1.2.t00825-RA
C2H2 ZF
909
930
YICPTCNQMFQRRIHFQKHVRK
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g09016
Acanthocheilonema viteae
nAv.1.0.1.g09016
N
0.827
LOAG_06793
Loa loa
LOAG_06793
N
0.802
nDi.2.2.2.g05139
Dirofilaria immitis
nDi.2.2.2.g05139
N
0.785
WBGene00248244
Onchocerca volvulus
WBGene00248244
N
0.782